Protein

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Genbank accession
XYM57741.1 [GenBank]
Protein name
short tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,87
Protein sequence
MPTYQYSNTPLYVSEGQTVQFRYEAPANFDTVEQVIIQIGDSTSFWVIETIPEDTAPDPYILRQINPADIHDPDNGNPAVYTYAETSAGPDAAPVGGGGLATPLRNGEEVITVNGLSDTVSVNLIISSNGLDQTEWAWRVRNWNGSSYDAWPVFTTGNNFPNPVPTVKNNDQVQVRVASSKFPADTRRLTVTIGSGSEDWEIITGSAPINTPNPVPVFNGLNNLNLQDVVYSNIVQISGLTATTADVSIVPTTGSFAIANSNATTTNADNFDVLTGATFSNTGAISNGQYLQLKGTASNTPNTPVNYSISIGSGSDIAGWEIRTGQGIDETPNNFIFTDLVEQVPGTQNILSEIETISGLTPGITVPLTIRGTDPQEANPRIKVNSGSTASISNIFVGNGDTIQLVMNAHPELPVAPETRTSYVGINIGNLQISNWNISNWYGPDDTPTFVVPSDAVNQTPGGTGVLGPILLSGYNVPITASITTPIAYDAGGNPTGEVINPIRMSVNGGPILNLPATIPNDPSGNPVSIMFFTDQPGNAEVDPVQGLSHYLEWDITFGTAATFTVKSINYAVKPIPPAFIGKWYTNKNEFFDEVAYQAAGSPVANATDYYTATKFDGLALGTVVPVTKENISGYGDLEARYPGFLECDGQQVNAADYPFLWEVIKNTYGGDGAYNEVSKAYTGTFNVPDYRNKRMAGKGIVDATRGASSFLEATNAGGSYDIVGSTGGYWYVSDVGVAGPDPLEQVSTTAGANVGTESEFYVLGTPRTFGTETTSAEVEFSVTGLVTATIGPVRDVRVIVPPHEHYYITGQPEQFNGDPVIPWNTPALYKTGQSGGGNSGEISDEPSSDAVYSIWQGGTVNFGGNNTAAEFDTQIGLTDGGNLRDILPLGPEGSSTQAVFGNYWASPTSILPNGNGYFRKDGGTLNDAGVVDTSEAQGRLDSYVSPEAEATHSHLLGTDPVLDQNTDFTYGNANAFGGSLKGLATFSSETTVTFNQADIEIELNTAEFNFNNSSKPIPSVAMDPQRKVPILAPFHKVKYIIKAY
Physico‐chemical
properties
protein length:1045 AA
molecular weight: 110996,77270 Da
isoelectric point:4,23134
aromaticity:0,09474
hydropathy:-0,23923

Domains

Domains [InterPro]
DC_0346
STR
1–1029
DC_0346
IPR037053
ATT
613–692
IPR037053
IPR011083
ATT
643–693
IPR011083
SSF88874
STR
643–754
SSF88874
XYM57741.1
1 1045
Architecture
STR
ATT
STR
STR 1-612 | ATT 613-693 | STR 694-1029 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XYM57741.1
1 1045
Domain Start End Length (AA) Confidence
N-terminal 1 65 65 0,9875
Central domain 66 588 524 0,1557
C-terminal 589 1045 456 0,5594
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-65
Central
66-588
C-terminal
589-1045

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage Sf-CH3
[NCBI] 		3413214 Viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYM57741.1 [NCBI]
Genbank nucleotide accession
PV340851.1 [NCBI]
CDS location
range 45454 -> 48591
strand +
CDS
ATGCCAACTTATCAGTATTCAAATACACCACTATACGTATCCGAAGGGCAAACAGTCCAGTTTCGCTATGAAGCTCCTGCGAACTTTGATACCGTTGAACAGGTAATCATCCAGATTGGTGATTCTACTTCGTTCTGGGTGATTGAAACTATTCCAGAAGATACTGCGCCTGATCCTTATATTCTGCGACAAATCAATCCCGCAGATATTCATGATCCAGATAATGGTAATCCTGCTGTCTATACGTATGCAGAAACATCTGCTGGACCTGATGCAGCACCAGTGGGTGGTGGTGGATTAGCAACACCACTGAGAAATGGTGAAGAAGTAATTACAGTCAATGGTCTATCTGATACAGTATCAGTTAATCTTATTATTAGTAGTAATGGTCTAGATCAAACAGAATGGGCGTGGAGAGTTAGAAATTGGAACGGATCTTCTTACGATGCATGGCCTGTATTTACTACTGGTAATAACTTTCCAAACCCAGTTCCTACAGTAAAGAACAACGATCAAGTTCAAGTTAGGGTTGCATCATCTAAATTCCCAGCAGATACCAGAAGACTAACTGTTACTATTGGTTCTGGATCAGAAGATTGGGAAATTATTACTGGTTCTGCACCTATCAATACACCCAATCCAGTTCCAGTATTCAATGGACTGAATAATCTCAATCTTCAGGATGTTGTTTATAGTAATATTGTACAAATCTCTGGACTAACGGCAACAACTGCTGATGTTAGTATTGTTCCTACTACAGGTTCATTTGCTATCGCTAATAGTAATGCTACTACAACAAACGCAGATAACTTTGATGTACTAACTGGTGCTACATTTTCAAATACTGGTGCTATTAGTAATGGACAATACTTACAACTCAAAGGTACAGCATCAAATACTCCCAATACACCAGTAAACTATTCTATTTCTATTGGTAGTGGTAGTGATATTGCTGGATGGGAAATTAGAACTGGTCAAGGTATTGATGAGACACCTAATAACTTTATCTTTACTGATTTGGTTGAGCAGGTTCCTGGTACTCAGAATATATTGTCTGAAATTGAGACTATTTCTGGTCTAACTCCTGGCATTACTGTTCCTCTCACTATTAGAGGCACTGATCCACAAGAAGCAAATCCAAGAATTAAAGTTAACTCTGGTTCTACTGCTAGTATTTCTAATATTTTTGTGGGCAACGGTGATACCATTCAGTTGGTTATGAATGCACACCCTGAGTTACCTGTTGCACCAGAGACAAGAACATCCTATGTTGGTATCAATATAGGTAATTTGCAAATATCAAACTGGAATATTTCTAATTGGTATGGTCCTGATGATACCCCAACTTTTGTTGTGCCATCTGATGCAGTTAATCAAACTCCAGGCGGCACTGGTGTTCTAGGACCAATTTTATTGAGTGGATATAACGTTCCTATTACTGCTTCTATTACTACACCAATTGCATATGATGCGGGTGGTAATCCAACAGGCGAAGTAATAAATCCTATTCGTATGTCTGTTAATGGCGGTCCTATTCTGAACTTGCCTGCAACTATTCCTAATGATCCATCAGGTAATCCTGTTTCGATCATGTTCTTTACAGATCAACCAGGAAATGCTGAGGTAGATCCTGTGCAAGGACTATCGCACTATCTTGAGTGGGACATTACATTTGGTACGGCAGCAACTTTTACTGTCAAATCAATTAACTATGCAGTTAAACCTATTCCTCCTGCATTTATTGGTAAGTGGTATACTAATAAGAATGAATTCTTTGATGAAGTAGCATATCAGGCAGCAGGATCACCAGTTGCTAATGCTACTGATTACTACACAGCAACTAAGTTTGATGGTCTAGCATTAGGTACAGTTGTTCCTGTAACCAAAGAAAATATTAGTGGATATGGTGATCTAGAAGCAAGATATCCTGGTTTCCTTGAGTGCGATGGTCAGCAAGTTAATGCAGCAGATTATCCATTCCTATGGGAGGTGATTAAAAACACATATGGTGGAGATGGAGCATATAATGAAGTAAGCAAAGCATATACAGGAACATTTAATGTTCCTGACTATAGAAACAAGAGAATGGCAGGTAAGGGCATTGTTGATGCAACTAGAGGTGCATCTTCATTCTTGGAAGCAACTAATGCAGGAGGATCTTATGACATTGTTGGATCTACTGGTGGTTATTGGTACGTGTCTGATGTGGGTGTTGCTGGTCCTGATCCTTTAGAGCAGGTTAGTACAACTGCTGGTGCAAACGTTGGTACAGAGTCTGAGTTCTATGTACTAGGAACACCAAGAACATTTGGTACTGAAACTACTAGTGCTGAGGTAGAGTTTTCGGTCACAGGTCTGGTTACTGCTACTATTGGTCCTGTTCGTGATGTTAGAGTTATAGTTCCACCACATGAACACTACTATATTACAGGTCAACCTGAACAATTTAATGGTGACCCTGTTATTCCATGGAATACACCTGCACTGTATAAGACTGGTCAAAGTGGTGGTGGTAACTCTGGAGAAATTTCTGACGAACCATCATCCGATGCAGTTTATAGTATCTGGCAAGGTGGTACTGTAAACTTTGGTGGAAATAATACTGCTGCTGAATTTGATACTCAAATTGGTCTAACTGATGGTGGAAATCTTAGAGATATTCTCCCATTGGGTCCTGAAGGTTCTAGCACCCAGGCAGTGTTTGGTAACTACTGGGCATCACCTACTAGTATTCTGCCTAATGGTAATGGATATTTCAGAAAAGACGGTGGTACACTAAATGATGCTGGTGTTGTTGACACATCAGAAGCACAAGGTAGACTAGATTCATATGTTTCACCAGAAGCAGAAGCAACACACTCTCACCTGTTGGGTACAGATCCTGTACTAGATCAGAATACTGATTTTACATATGGTAACGCTAACGCATTTGGTGGATCACTCAAAGGTCTTGCTACGTTCTCATCTGAAACTACAGTTACATTTAACCAGGCAGATATTGAGATTGAATTGAACACTGCTGAGTTTAATTTTAATAACTCAAGCAAACCAATTCCATCTGTTGCAATGGATCCACAGCGTAAAGTTCCTATCCTAGCACCCTTCCATAAAGTCAAATATATAATAAAGGCATATTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
21f79bd0bd8379f2cc705c9faad8ab26345271cec408ebfae581ce27e705b8d0
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,6940
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50