Protein

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Genbank accession
WBF82648.1 [GenBank]
Protein name
long tail fiber protein distal subunit
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,63
TF
Evidence RBPdetect2
Probability 0,93
Protein sequence
MATLKQIQFKRSKVAGVNPTAAQLAEGELAINLKDRTLFTKDDLGNIISLGFAKGGDINGNVTQNGDYLQNGTYNLNGNQFVYAGKYIEFLPKIAGNGAWANQHLNKAPIFTDLSSTTSVSEYHPLIKQRYKDGTFSAGTLVNEGSFKFHYIDETGTSKYWTFNRNGNFIVDSGSIEVRTGNISASGNINSANGIITGPEIVTKNINFSTKRFVANANIGYDWVSLPTWVYNPPADGSDNTTNGLNYLRKLRASSASSIFHEIADCRKGKPQEISWWTGVGPESFQWAFDTSGRITAGKSISVGLPDNGTNGRYPLDSAISIGIAIGDNDTGIKWVRDGVIDFMANGISSATILNKGINSTKKLMVGYSRDSGTTWDYPNNNQAMFTARTDVDGNNNGDGQTHIGYSSNSKMYHYFRGTGRMSISMGDGLLVEPGILDIKTGSNSLNLRADGTIASVQTLKLNNGLYFNGDGTNASLVFKAASGIDGTKQILWEGGTRAGQNKSYVTVKAWGNSFNASGDRNRETVFEVSDGQGYYFYSQRVAPSGSETTGPVVTQFNGQVNARGSIITDGSFKVNGLSTLVGNVTMSNGLFVQGGSSITGQVKIGGTADALRIWNAEYGAIFRRSEDKLYIIPTPQNAGESGGISNLRPFYITLSDGQVSMDHVVDIGGGRFKVDTTGTTAGQRITVNMASDAIRINAPTQESSNFIQGRKADVPKWYLGIGDGGNVVRMHSYTYSHGIALNSDTVDIAKPLRIGSAQLGTDGNITGGSGNFANLNTTINNLKTDIVSSYPIGAPIPWPTDTPPDGYAIMEGQTFDVGLYPKLAAVYPSGALPDMRGQTIKGKPSGRAVLSTEADGVKSHSHSASASSTDLGTKTTSSFDYGTKTSSSFDYGTKTSNTTGNHNHTVSGNTGSAGAHQHARSGPQVQGGIPTSVFYDGYNSAGPNGNAKFTATVSGATASSNMAKTSSDGAHTHSWSGTTSATGNHAHTVGIGAHTHSVGIGAHTHTVAIGSHGHTITVNATGNTENTVKNVAFNYIVRLA
Physico‐chemical
properties
protein length:1041 AA
molecular weight: 110143,27140 Da
isoelectric point:8,66347
aromaticity:0,08646
hydropathy:-0,37627

Domains

Domains [InterPro]
DC_0538
STR
1–1039
DC_0538
G3DSA:6.20.80.10
STR
692–751
G3DSA:6.20.80.10 SSF88874 SSF88874
IPR048388
ATT
694–768
IPR048388 IPR037053
IPR051934
Unmapped
744–1041
IPR051934
IPR011083
ATT
794–841
IPR011083
WBF82648.1
1 1041
Architecture
STR
ATT
STR
ATT
STR
STR 1-693 | ATT 694-768 | STR 769-788 | ATT 789-842 | STR 843-1040 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WBF82648.1
1 1041
Domain Start End Length (AA) Confidence
N-terminal 1 845 845 0,0604
Central domain 846 1030 186 0,1112
C-terminal 1031 1041 10 0,9964
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-845
Central
846-1030
C-terminal
1031-1041

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage a20
[NCBI] 		3017791 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WBF82648.1 [NCBI]
Genbank nucleotide accession
OQ067374 [NCBI]
CDS location
range 60518 -> 63643
strand +
CDS
ATGGCTACATTAAAACAGATACAATTTAAAAGAAGCAAAGTAGCAGGAGTTAATCCTACTGCAGCACAATTAGCCGAAGGCGAATTAGCGATAAACTTAAAAGATCGAACTCTTTTTACTAAAGATGACCTCGGTAATATTATTAGCCTAGGCTTTGCTAAGGGCGGGGATATTAACGGTAATGTAACTCAAAATGGCGATTATTTACAAAACGGTACATATAATCTTAATGGAAACCAGTTTGTTTATGCAGGAAAATATATTGAATTTTTACCTAAAATAGCTGGTAATGGCGCTTGGGCAAATCAACACCTAAATAAAGCCCCTATCTTTACAGATTTGAGTTCAACTACCTCAGTATCAGAATATCATCCTCTGATTAAGCAACGTTATAAAGACGGTACTTTTTCTGCCGGTACATTAGTAAACGAAGGTAGTTTTAAATTCCATTATATTGATGAAACCGGGACTTCAAAATATTGGACTTTTAATCGAAATGGTAATTTCATCGTAGATTCCGGTAGTATTGAAGTTCGTACCGGTAATATTTCTGCTTCAGGCAATATAAACTCTGCTAATGGTATTATCACCGGTCCTGAAATTGTTACTAAAAATATTAATTTTAGTACAAAAAGATTTGTAGCTAATGCTAACATTGGATATGATTGGGTTTCTTTACCTACTTGGGTTTATAACCCACCGGCTGATGGTTCTGATAATACTACTAACGGTTTAAACTATTTGCGTAAATTGCGTGCATCAAGTGCATCAAGTATTTTCCATGAAATTGCCGATTGCCGAAAAGGTAAGCCACAAGAAATTTCTTGGTGGACAGGTGTAGGCCCGGAATCTTTCCAATGGGCGTTTGATACCTCCGGTCGTATTACTGCAGGTAAATCGATTTCGGTAGGTCTTCCTGATAATGGTACAAATGGACGTTATCCTTTAGATTCTGCGATTTCTATAGGTATTGCAATTGGTGATAACGACACCGGTATTAAATGGGTCCGCGACGGTGTTATTGATTTCATGGCTAACGGTATTTCATCCGCTACCATTTTGAATAAAGGTATTAACAGCACTAAGAAATTGATGGTCGGTTATAGCCGCGATTCTGGTACTACTTGGGATTACCCAAATAACAACCAAGCAATGTTTACTGCGCGTACCGATGTTGATGGTAATAATAATGGTGATGGTCAAACTCATATCGGTTATAGCAGTAATTCTAAAATGTATCACTATTTCCGTGGCACGGGTCGTATGTCCATTAGTATGGGTGATGGGCTTCTTGTTGAGCCTGGCATTTTAGATATTAAAACCGGTTCAAATTCGTTAAATTTGCGTGCTGATGGTACCATCGCTTCTGTTCAAACATTAAAACTTAATAATGGATTATATTTTAATGGTGATGGAACTAATGCTTCTCTAGTTTTTAAAGCAGCTTCAGGTATTGATGGCACTAAGCAAATTTTGTGGGAAGGCGGTACTCGTGCTGGTCAGAATAAAAGCTATGTAACTGTTAAAGCATGGGGTAATTCATTTAACGCATCTGGCGATCGTAATCGTGAAACGGTTTTTGAAGTATCAGATGGGCAAGGATATTATTTTTATTCACAGCGTGTGGCTCCAAGTGGCTCTGAAACTACTGGGCCTGTTGTAACCCAGTTCAATGGACAAGTTAATGCTAGAGGAAGTATTATTACTGACGGAAGTTTTAAAGTTAATGGATTAAGCACTTTAGTCGGTAATGTTACCATGTCTAATGGTTTGTTTGTCCAAGGTGGTTCTTCTATTACTGGACAAGTTAAAATTGGCGGAACGGCAGATGCATTAAGAATTTGGAATGCCGAATACGGTGCTATTTTCCGACGTTCTGAAGATAAGCTTTATATTATTCCAACTCCGCAGAATGCCGGTGAATCAGGTGGTATTTCTAATTTACGTCCGTTCTATATTACATTAAGTGATGGTCAAGTTTCTATGGACCATGTAGTAGATATAGGCGGCGGTAGATTTAAAGTAGATACAACCGGTACTACGGCTGGACAACGCATAACAGTAAATATGGCGTCAGATGCTATTAGAATAAATGCCCCAACACAAGAATCTTCTAACTTCATCCAAGGACGTAAAGCGGATGTTCCGAAATGGTATTTAGGTATTGGCGATGGCGGTAACGTCGTTCGTATGCACAGTTACACCTACTCCCATGGTATTGCATTAAACTCTGATACGGTTGATATAGCTAAACCTCTTAGAATAGGTTCAGCTCAATTAGGTACTGATGGTAATATCACCGGTGGTTCTGGCAACTTTGCTAACTTGAATACCACAATAAATAACCTTAAGACGGATATTGTGTCGAGTTATCCAATTGGTGCTCCGATTCCTTGGCCTACTGATACACCTCCTGATGGTTATGCCATAATGGAAGGTCAAACATTTGATGTTGGCTTGTATCCTAAGTTAGCTGCGGTGTATCCTTCCGGCGCTCTGCCTGATATGCGTGGTCAAACTATCAAGGGTAAACCATCTGGGCGCGCTGTATTAAGTACAGAAGCAGACGGTGTTAAGTCACATAGCCATAGTGCAAGTGCATCAAGCACAGATTTGGGTACTAAGACCACTTCTAGTTTTGATTACGGTACTAAAACATCTTCAAGCTTTGATTATGGTACTAAGACCAGCAATACCACTGGTAACCATAACCATACAGTGAGTGGTAATACTGGTTCTGCTGGTGCACACCAACATGCGCGTTCAGGCCCTCAGGTACAAGGCGGCATACCCACTAGCGTATTCTATGATGGATACAATAGTGCGGGTCCAAACGGCAACGCTAAATTCACTGCAACCGTGAGCGGTGCTACTGCATCGTCGAATATGGCCAAAACTTCTTCAGACGGTGCCCACACCCATAGTTGGTCAGGAACTACTAGCGCTACGGGTAACCATGCTCATACTGTGGGTATTGGTGCTCATACCCATTCGGTAGGTATTGGTGCTCATACGCATACTGTTGCAATTGGTTCCCATGGACATACAATAACTGTAAATGCCACAGGAAATACAGAAAACACAGTTAAAAACGTTGCTTTTAACTATATCGTTCGTTTAGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
7b844b44634928da2640c56af7786681a99869fb3cda27a3317e0fb54820ed2f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5080
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Development of a CRISPR-therapeutic designed to reduce E. coli in hematological cancer patients Placeholder,P. 1998 — GenBank