Protein

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Genbank accession
XYN15911.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,78
Protein sequence
MPATVVTEDWLNAVQGELVAVIEGAGLALDKPDNAQLLAAIQALIPPPASAWRTGDVKLTMLPTPEAGWISCNDGTIGNAGSSASTRANADCEALFTLLWNNVSNTYAPVSGGRGASAAADWAADKTIGLTKMLGRALGVAGAGASLTARALGQTVGAETHTLSQSEMPSHTHQGGNTINNGSGYSVIGAGGTNVAMGPLTTSSAGSGTAHNNMQPTTFLYAHIKL
Physico‐chemical
properties
protein length:226 AA
molecular weight: 22767,23010 Da
isoelectric point:5,39899
aromaticity:0,04425
hydropathy:0,02920

Domains

Domains [InterPro]
DC_0512
STR
1–223
DC_0512
SSF88874
STR
127–226
SSF88874
XYN15911.1
1 226
Architecture
STR
STR 1-226
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XYN15911.1
1 226
Domain Start End Length (AA) Confidence
N-terminal 1 164 164 0,3287
Central domain 165 215 52 0,0014
C-terminal 216 226 10 0,9986
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-164
Central
165-215
C-terminal
216-226

Taxonomy

  Name Taxonomy ID Lineage
Phage Bordetella phage vB_BbrM_PBb002
[NCBI] 		3447839 No lineage information
Host Bordetella bronchiseptica
[NCBI] 		518 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYN15911.1 [NCBI]
Genbank nucleotide accession
PV870137.1 [NCBI]
CDS location
range 1602 -> 2282
strand +
CDS
GTGCCCGCGACCGTCGTAACCGAAGATTGGCTGAACGCGGTACAAGGCGAGCTTGTTGCCGTGATCGAAGGCGCGGGGCTGGCGCTGGACAAGCCCGACAACGCGCAACTGTTGGCGGCCATTCAAGCGCTGATCCCGCCGCCTGCGTCGGCCTGGCGTACCGGCGATGTGAAACTGACGATGTTGCCGACGCCGGAAGCGGGTTGGATTTCCTGCAATGACGGAACCATCGGCAATGCTGGCAGTTCCGCCAGCACGCGCGCGAACGCGGATTGCGAAGCGCTTTTTACGTTGCTGTGGAACAACGTAAGCAACACCTATGCGCCGGTATCTGGCGGGCGCGGCGCGAGCGCTGCGGCCGATTGGGCGGCAGACAAGACCATCGGCCTTACGAAGATGTTGGGCCGCGCGCTGGGCGTGGCTGGTGCTGGCGCGAGCCTGACGGCGCGAGCGTTGGGGCAGACTGTCGGCGCGGAAACGCACACGCTTTCGCAATCCGAAATGCCGTCGCACACACACCAAGGCGGGAACACCATCAACAACGGCAGCGGGTATTCGGTCATAGGTGCGGGCGGAACCAATGTCGCAATGGGGCCGCTGACGACCAGCAGCGCGGGCAGCGGCACGGCGCATAACAACATGCAGCCGACGACGTTTCTTTACGCCCACATCAAATTGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a702b90c76093f95ec651a5a60ab86b8cb5bb0936076e04e12949c42cdca0115
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8561
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50