Protein

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Genbank accession
AUR83833.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MISTIFSKSDPAVGGVTFDCIFNETMEASYESTDYSVESGAVYQDHIRKLPKMISMRVAVSDTPFAGPLGSLLATGAGYVGSKLPPLVTGIAGTATSLFNASNSAAAPDTRSAAAWQAMIEAADKMDVFEVVTTKGIYQNYHIKKIYYECNPDNENSIEIIIDMKEVRTFQSNIESGQPSKAQLRTGTSESIQASPPANLGGSALESI
Physico‐chemical
properties
protein length:208 AA
molecular weight: 22164,66840 Da
isoelectric point:4,74471
aromaticity:0,07692
hydropathy:-0,11923

Domains

Domains [InterPro]
DC_1370
STR
1–208
DC_1370
IPR048494
ATT
18–171
IPR048494
AUR83833.1
1 208
Architecture
STR
ATT
STR
STR 1-17 | ATT 18-171 | STR 172-208
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.042.O._10N.286.45.B8
[NCBI] 		1881301 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio lentus
[NCBI] 		136468 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR83833.1 [NCBI]
Genbank nucleotide accession
MG592425.1 [NCBI]
CDS location
range 24883 -> 25509
strand +
CDS
ATGATAAGCACTATATTCAGCAAGTCAGACCCTGCCGTTGGCGGGGTTACGTTTGACTGCATTTTCAATGAAACAATGGAAGCTAGTTATGAGTCTACCGATTACTCAGTAGAGAGCGGGGCTGTTTATCAAGACCATATTCGCAAGCTACCAAAAATGATTTCTATGCGAGTTGCTGTAAGTGATACGCCATTTGCTGGCCCTCTCGGATCTTTGCTTGCCACTGGTGCGGGATATGTTGGTTCAAAGCTTCCGCCACTAGTAACGGGTATCGCTGGTACTGCAACCTCACTATTTAACGCATCAAACTCAGCAGCTGCGCCGGACACTAGAAGCGCGGCCGCGTGGCAAGCAATGATAGAAGCTGCCGACAAGATGGATGTTTTCGAAGTGGTGACAACAAAGGGTATTTATCAAAACTACCACATCAAGAAGATTTACTACGAGTGCAACCCTGACAATGAAAACTCAATTGAGATCATAATCGATATGAAAGAGGTTCGAACTTTTCAATCAAACATTGAGTCAGGACAACCAAGTAAAGCTCAATTAAGAACAGGAACTAGCGAATCAATACAGGCCTCACCGCCTGCAAACCTTGGAGGTTCAGCTCTTGAGTCGATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ef65283fad6031bc0775b48451356b44d7a788b9fde521c402d177b10cbc176a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7734
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank