Protein

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Genbank accession
ACY75791.1 [GenBank]
Protein name
predicted protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAVTRIEIDTTGRDLVGTNLADANGVWGELDEGIKVWLGDICNPVLGTINGGTGYTDNTYTDVSLVRDVANDVYGGRDMLCTVVVSGGTVTTVTITHKGNGFVTGDVLIFEDLAEVGGSGTDFSVPVTSADGTIGLIYDPDQRDSTTSEQGWLFGLERPSGNTGSYTYGNMFYKTSPTHDRFYHCNIRNWTPSTAMNGYGDMERDSDYEYFWDESDGDGHKISLTWCPDADERFLCFSDDFNNDPMGLAQMVRSGGTYPSLDLVSTWCTFYANTSNLYTRPSTSVSPTNPFVGSNNFSSAINAVPLDDNVIMTGHPVRTRSLYVGSLPSRLGTHLNSGRNWGQTAAMGSDVWRFHVPNFLIRESA
Physico‐chemical
properties
protein length:365 AA
molecular weight: 39807,32030 Da
isoelectric point:4,42016
aromaticity:0,10685
hydropathy:-0,32630

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ACY75791.1
1 365
Domain Start End Length (AA) Confidence
N-terminal 1 22 22 0,0555
Central domain 23 221 200 0,1552
C-terminal 222 365 143 0,9640
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-22
Central
23-221
C-terminal
222-365

Taxonomy

  Name Taxonomy ID Lineage
Phage Cyanophage PSS2
[NCBI] 		658401 No lineage information
Host Prochlorococcus marinus str. MIT 9313
[NCBI] 		74547 Bacteria > Cyanobacteria > Prochlorales > Prochlorococcaceae > Prochlorococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ACY75791.1 [NCBI]
Genbank nucleotide accession
GU071090 [NCBI]
CDS location
range 79666 -> 80763
strand +
CDS
ATGGCCGTCACTCGGATTGAGATAGACACCACTGGCAGAGATCTGGTGGGCACAAACCTTGCGGACGCGAACGGCGTATGGGGTGAACTGGATGAAGGCATCAAGGTTTGGTTAGGTGATATCTGTAACCCAGTATTGGGAACTATCAACGGCGGCACTGGGTACACCGACAACACCTATACCGATGTGAGCCTGGTTCGAGATGTAGCCAATGACGTCTACGGCGGCCGGGACATGCTCTGCACCGTCGTTGTCAGTGGTGGCACGGTGACCACTGTGACGATCACTCATAAGGGGAATGGATTTGTTACCGGAGACGTTCTGATCTTCGAGGACTTGGCAGAGGTTGGCGGTTCGGGCACTGACTTCAGCGTCCCTGTTACCTCAGCTGACGGGACAATTGGGCTGATCTATGACCCTGATCAAAGGGACTCAACTACTAGCGAACAGGGCTGGCTCTTTGGCTTGGAGAGGCCTAGTGGGAACACCGGCTCGTATACCTACGGGAACATGTTCTACAAGACAAGCCCGACCCATGACCGTTTCTATCACTGCAACATTCGTAACTGGACACCAAGTACAGCAATGAATGGCTACGGGGATATGGAAAGAGATTCGGACTATGAATACTTCTGGGACGAATCAGATGGTGATGGCCACAAGATCAGCCTCACATGGTGCCCTGATGCAGACGAGCGGTTCCTCTGCTTCTCAGATGATTTCAACAATGATCCTATGGGGCTTGCCCAGATGGTCAGGTCAGGTGGGACCTATCCGTCTTTAGATCTAGTTAGTACATGGTGCACCTTTTACGCCAATACTTCGAATCTTTATACAAGACCTAGTACAAGTGTTTCCCCTACCAATCCTTTTGTTGGTAGCAATAATTTCTCATCTGCCATCAACGCAGTCCCTCTAGATGACAATGTGATCATGACCGGCCACCCTGTTCGGACTAGGTCTCTATATGTGGGCTCTTTGCCTTCGAGGCTTGGGACTCACCTGAACTCCGGGCGCAACTGGGGACAGACAGCCGCGATGGGCTCTGACGTGTGGAGGTTCCATGTGCCCAACTTCCTGATCAGGGAGTCGGCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e3246943ed1a9502420baa8a227939295a70e1c1eab15c74bbfbc15a0b44c4bc
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4991
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Cyanophage PSS2 Henn,M.R., Sullivan,M.S., Osburne,M.S., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Koehrsen,M., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Borenstein,D., Chen,Z., Engels,R., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E.R., Heiman,D., Hepburn,T., Howarth,C., Jen,D., Larson,L., Lewis,B., Mehta,T., Park,D., Pearson,M., Richards,J., Rizzolo,K., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., Walk,T., White,J., Yu,Q., Coleman,M.L., Huang,K.H., Weigele,P.R., DeFrancesco,A.S., Kern,S.E., Thompson,L.R., Fu,R., Hombeck,B., Chisholm,S.W., Haas,B., Nusbaum,C. and Birren,B. 2011-09-23 — GenBank