Protein

View in Explore
Genbank accession
WQZ40889.1 [GenBank]
Protein name
pre-neck appendage protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MADVKGRGFNVILNDFEFNGEPSDPQRPKPTSVDDMIFGCKLLVSGNGGFSSGAIKFEGNYTEETLGMLYIKNTGGTCQGVDINCNMAYPYNTTEMENIGIYLDGWLDRINISNNNMYFAKKLVLNGNQIQG
Physico‐chemical
properties
protein length:132 AA
molecular weight: 14553,23570 Da
isoelectric point:4,56442
aromaticity:0,10606
hydropathy:-0,35152

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WQZ40889.1
1 132
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0064
Central domain 11 121 112 0,9988
C-terminal 122 132 10 0,2666
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-121
C-terminal
122-132

Taxonomy

  Name Taxonomy ID Lineage
Phage Clostridium phage vB_CpeP_15N3
[NCBI] 		3108091 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Clostridium perfringens
[NCBI] 		1502 cellular organisms > Bacteria > Bacillati > Bacillota > Clostridia > Eubacteriales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WQZ40889.1 [NCBI]
Genbank nucleotide accession
OR947472 [NCBI]
CDS location
range 11558 -> 11956
strand +
CDS
TTGGCAGACGTCAAGGGGCGTGGTTTCAACGTAATATTGAATGACTTTGAGTTTAACGGCGAACCGTCCGACCCTCAAAGACCTAAGCCAACATCTGTTGACGACATGATTTTTGGTTGTAAATTACTGGTGAGTGGTAATGGTGGATTTTCAAGTGGAGCAATAAAGTTTGAAGGAAACTACACAGAGGAAACTTTAGGTATGTTATACATTAAGAATACTGGTGGTACTTGCCAGGGCGTCGACATTAATTGTAATATGGCATATCCTTATAACACTACAGAAATGGAGAACATTGGAATTTATTTAGATGGTTGGTTAGATAGAATTAACATATCAAATAATAATATGTATTTCGCTAAAAAGTTAGTTTTAAATGGAAACCAAATTCAGGGATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
f0f12e06cae82da7651fb8a6664e15bb8808d978e340a96e50ab0729a6421ddf
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7043
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50