Protein

View in Explore
Genbank accession
WPJ20729.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MAIIKYPDWLPLAQRASKNLTQQTPFRSDQPAVGAPIFQKLTTDIAATWSLTWKFTLAEERAFIQWLRSPSYLNKANNWFTMMIDLGGSELQEQTLHFTDYPVQTSIDGGVVTWTGNVIAKKLNNTMDEFDDVLVELDYRWYSWLDEIVNRELPQVYMTPILHMPINMLSSTLDSRIVYDGPRVYYVNRNGNLVQSAANEWPLTFIDGVAVGRVPPEPAASNILIKSSKLSDASWSKTRTTVSDAVDVILNGGTFSLIPTTTNGNHTVQQSVSYTFAEGDVYTLSYVAKAYGYNYARLRAADDAGFISDCRANLQDGTIFAGDTNSTIINCGGGWYRFTEQVEIRQGGASSLLLASWVYDNTQAATFAGDGVSGILVCAMQIENSSFATSPIVTEASPVTRTTASAKVAMNGATSIDITYSDGSVVNVQAVDDCATIPQADSAWGSKYITTIKFNV
Physico‐chemical
properties
protein length:456 AA
molecular weight: 50051,58660 Da
isoelectric point:4,68930
aromaticity:0,10526
hydropathy:-0,10088

Domains

Domains [InterPro]
DC_0353
STR
14–456
DC_0353
NF048003
Unmapped
217–402
NF048003
WPJ20729.1
1 456
Architecture
STR
STR 14-456
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Acinetobacter phage vB_AbaM_AB4P2
[NCBI] 		3076812 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Acinetobacter baumannii
[NCBI] 		470 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Moraxellales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WPJ20729.1 [NCBI]
Genbank nucleotide accession
OR544125.1 [NCBI]
CDS location
range 26346 -> 27716
strand +
CDS
ATGGCTATCATCAAATACCCTGACTGGCTGCCACTCGCACAGCGCGCCAGTAAAAACCTGACACAGCAAACTCCGTTCCGCAGTGACCAGCCTGCGGTAGGAGCACCAATTTTCCAGAAGCTGACAACCGACATTGCGGCGACATGGAGCCTGACGTGGAAGTTTACACTGGCAGAAGAACGCGCATTCATCCAGTGGTTGCGCAGTCCTAGCTACCTCAACAAGGCAAACAACTGGTTCACCATGATGATTGACCTCGGCGGTAGCGAATTGCAGGAGCAGACGCTGCATTTTACCGATTATCCGGTGCAAACCAGCATTGATGGTGGCGTGGTTACGTGGACTGGCAATGTTATCGCTAAGAAGCTCAATAACACGATGGATGAGTTTGATGATGTTCTGGTTGAACTGGATTACAGATGGTATAGCTGGCTGGATGAAATTGTTAACCGTGAACTTCCGCAAGTCTATATGACACCTATATTGCATATGCCAATTAACATGCTGTCATCTACGCTTGACAGTCGCATTGTTTACGATGGGCCGCGGGTTTACTACGTCAACCGCAATGGTAATCTTGTGCAGTCCGCCGCTAATGAATGGCCACTTACGTTTATTGACGGGGTTGCTGTTGGTCGTGTTCCACCTGAACCTGCAGCCAGCAATATACTGATTAAATCGTCGAAATTATCTGACGCATCGTGGTCAAAAACTCGCACAACGGTGTCAGATGCAGTTGATGTAATCCTAAACGGAGGTACGTTCTCGCTAATCCCGACCACGACTAACGGCAACCATACCGTACAACAATCAGTGTCTTACACTTTTGCGGAGGGTGATGTATACACCCTCAGTTACGTTGCTAAGGCCTATGGTTATAATTATGCGAGACTTCGCGCCGCTGATGATGCGGGGTTTATTTCTGATTGTCGGGCTAATCTGCAGGACGGAACTATATTCGCTGGAGACACTAATAGTACGATAATTAACTGTGGTGGTGGTTGGTACAGATTTACCGAGCAAGTGGAGATACGTCAAGGCGGGGCTTCTTCTTTACTATTAGCATCGTGGGTGTACGACAATACCCAAGCTGCGACGTTTGCGGGGGACGGTGTTAGCGGGATATTAGTATGCGCGATGCAAATAGAAAACTCATCGTTTGCCACATCCCCGATAGTAACCGAGGCGTCACCGGTAACCCGCACGACGGCATCGGCAAAAGTAGCAATGAATGGCGCAACAAGCATTGACATTACATATTCAGACGGCTCTGTGGTAAACGTTCAGGCTGTTGACGATTGCGCCACCATCCCGCAGGCTGATTCTGCGTGGGGTAGTAAATACATCACAACAATAAAATTCAACGTCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
e5b3a1352156b69bdf163f5d81c2199d2ba5a38b783e40484787ce5d4e5005c4
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,9131
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The biological characteristics and genomic analysis of a novel Acinetobacter baumannii phage vB_AbaM_AB4P2 Tan,Y. 2023-05-11 — GenBank