Protein

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Genbank accession
XXJ63311.1 [GenBank]
Protein name
fusion long tail fiber distal subunit
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,64
TF
Evidence RBPdetect2
Probability 0,86
Protein sequence
MKLMAELRSTTAIGGNIVWHGGNLRFDPQGETVLYNGYKLYTENDKPDPHTDLTVPVVKLGGDTMTGDLVIAKATAQLHLSSTANTDASLYLTEDSGNHGVRYHYDGDVNQWQIIRRESGAENVVMYGSRSNNNIVINGIGYVNTTQRIFADNYHPNADVWTTARTLTIGETGKSVNGSANVSWSLAEIGAAADTGDSTKTFDAYSINLTNIEKSNLDTDGELGFDSSQGLLVYRTQQGVSGAAVTVLDGANVKAGHGLSISNLLAGGMGTETFTFDVLSAPKWSTARTLTLSGDVTGSVSIDGSSNVTLTTAVANDSHTHDGRYYTEAEADGRFVNSAGDTMTGDLNLDSRSLTFNSGASLIRSTNPGTALIPGTDSALNIYGAVNGHVNVVLSANDANDSFNVISSEGTATSGHTYTRRSFWVNGQGNTYAAGNMYVNDSQRVFADNYHPNADSLTTARTINGTSFNGTANITTANWGSTRTLTIGNTGKSVNGSGNVSWSLSEMGAFPLNTSNGTPVAAYYLKNGTGTTGTKIRLPYNANAGKMFIFTVRVYQNYETHDVQFSGYLYASINQWHSPKAIMIAGTNSISVRMGRDDDGRAYVWLAGGNYRGVAVLDVVSGYSTANWTTGWSITESDSTPNLALSTTVQPVASVNGANATGTWPISISGSAPSLTTARTINGTSFNGTGNITTANWGTARTLSLSGDASGSVSINGSSNVTLSVTVANDSHTHDGRYYTESESNARYVLKSGDTMTGVLTTRNPIAASTSVGNTGSAIYGGIVQLDATNKYAMPYRFLTRISSGYQMHHGIGAWRSGSGWTGGTTISCGNNDGGPDRHFRFNNDGYIEFWVTDSQNTATLRGNITGNAATATWADTVDVNTSTSTSFYGLVWHSGDTLYASENQGLTVRPSDGFTKIKHGYLGNERLSHDTTGRIVARNTAGRRAGMYGTYDSNKIAHIWSMGTSYMIDDSGATFGNLYGLAYKHTNNTTGGTMAGGHQMVWCANGTGKSAMGDNIWTSGNVTAYSDIRVKTNIERIQNPLDKISKIGGYTYDRTDQDCARQTGVIAQEILEVLPEAVTGGPTEDDPEGHYSVAYGNIVGLLIEGIKEEKRKREALEERIARLEALLS
Physico‐chemical
properties
protein length:1129 AA
molecular weight: 120108,25270 Da
isoelectric point:5,61924
aromaticity:0,08415
hydropathy:-0,36439

Domains

Domains [InterPro]
DC_1903
ATT
1–271
DC_1903 DC_0760 DC_0613
IPR005601
STR
62–173
IPR005601 DC_1903 DC_2177 IPR030392 Coil
IPR030392
CHP
1027–1121
IPR030392
XXJ63311.1
1 1129
Architecture
ATT
STR
RBD
ATT 1-398 | STR 399-747 | RBD 748-1129
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XXJ63311.1
1 1129
Domain Start End Length (AA) Confidence
N-terminal 1 236 236 0,1261
Central domain 237 435 200 0,3425
C-terminal 436 1129 693 0,7991
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-236
Central
237-435
C-terminal
436-1129

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage QD01
[NCBI] 		3440539 No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XXJ63311.1 [NCBI]
Genbank nucleotide accession
PV785814 [NCBI]
CDS location
range 165240 -> 168629
strand -
CDS
ATGAAACTAATGGCAGAATTACGTTCAACAACCGCGATTGGCGGTAACATAGTATGGCACGGAGGTAATTTACGTTTTGATCCGCAAGGGGAAACGGTTCTTTACAACGGCTATAAACTCTATACAGAAAATGACAAGCCAGACCCGCATACTGATTTAACCGTACCTGTTGTTAAACTTGGTGGCGATACAATGACTGGCGATCTTGTCATTGCTAAAGCAACTGCTCAACTTCATTTAAGCAGTACTGCAAACACAGACGCAAGTTTGTACTTGACTGAAGATAGTGGCAATCATGGTGTTCGCTATCACTACGACGGTGATGTGAATCAATGGCAAATTATTCGCCGTGAGTCAGGTGCTGAAAATGTCGTTATGTACGGTTCTCGTTCTAATAACAACATTGTGATTAACGGTATTGGTTACGTCAATACAACACAGAGAATCTTTGCAGACAACTATCACCCGAATGCAGACGTGTGGACGACTGCAAGAACATTGACAATCGGTGAAACTGGTAAGTCTGTCAATGGTTCAGCTAACGTGAGTTGGTCTCTTGCTGAAATAGGTGCTGCTGCTGATACTGGTGATTCTACTAAGACTTTCGATGCGTATAGCATCAACTTGACGAACATTGAGAAATCAAATCTAGACACTGATGGTGAACTGGGATTTGATTCGTCTCAGGGCTTATTGGTGTATCGTACTCAACAAGGTGTATCAGGTGCTGCGGTAACTGTACTAGATGGTGCGAACGTTAAAGCGGGTCACGGTCTTAGTATCTCAAATTTGCTTGCGGGCGGAATGGGGACTGAGACATTTACGTTTGATGTTCTGTCAGCACCAAAATGGTCAACTGCTCGTACATTGACACTATCTGGTGATGTGACTGGCTCAGTATCAATCGACGGTAGTTCAAACGTTACATTGACAACCGCAGTTGCAAATGATTCGCATACTCACGATGGTCGTTACTACACCGAAGCAGAAGCTGATGGTCGATTTGTAAACTCGGCTGGTGATACAATGACTGGTGATTTGAACTTAGACTCTAGAAGTCTAACTTTCAACTCAGGCGCGTCGTTAATTCGTTCTACTAACCCGGGTACTGCTTTGATTCCGGGCACTGATAGCGCGTTAAACATATACGGTGCAGTTAACGGCCATGTTAACGTTGTTCTATCGGCAAATGACGCGAACGACTCATTTAACGTTATTTCATCTGAAGGTACAGCAACGAGTGGGCATACTTACACAAGACGTTCGTTCTGGGTTAATGGTCAGGGGAATACATACGCTGCTGGTAACATGTATGTTAACGATTCTCAACGAGTATTTGCAGACAACTACCACCCGAATGCAGATAGTTTAACAACTGCTAGAACGATCAACGGAACATCGTTCAACGGCACTGCTAATATTACAACTGCTAACTGGGGTTCGACTAGAACGTTGACAATCGGTAATACTGGTAAATCAGTAAACGGCTCTGGTAACGTTTCTTGGTCATTGAGTGAAATGGGAGCATTCCCATTAAATACATCAAACGGTACTCCTGTTGCCGCTTATTATCTAAAAAATGGCACAGGGACGACTGGTACGAAGATACGTTTACCGTACAACGCGAACGCAGGCAAGATGTTTATCTTTACTGTTCGTGTATATCAGAATTACGAGACACATGATGTTCAGTTTAGTGGGTATTTGTACGCATCTATTAATCAGTGGCACTCGCCTAAAGCAATAATGATTGCAGGGACGAACTCAATATCAGTTAGAATGGGGCGTGATGATGACGGTAGAGCGTATGTTTGGCTAGCTGGTGGTAATTACAGAGGTGTTGCTGTTCTGGATGTTGTTTCTGGCTATAGTACTGCAAACTGGACAACTGGTTGGTCTATCACCGAGAGCGATTCAACGCCAAACCTGGCATTGTCTACAACTGTTCAGCCTGTAGCATCTGTAAATGGTGCTAATGCAACTGGTACATGGCCTATTAGCATTTCGGGTAGTGCACCTAGTTTAACAACTGCTAGAACAATTAACGGCACTTCGTTTAACGGTACAGGCAATATCACTACCGCGAACTGGGGTACTGCTAGAACGTTGTCTCTATCTGGTGATGCAAGTGGGTCAGTGTCAATTAATGGTAGTTCAAACGTTACTTTGTCAGTTACTGTAGCAAATGATTCACACACTCATGATGGTCGTTACTATACCGAGTCTGAGTCGAATGCTAGATATGTTCTGAAATCAGGCGATACGATGACGGGCGTACTCACAACTCGAAACCCTATTGCGGCAAGTACTTCAGTTGGGAATACAGGGTCGGCTATATATGGCGGCATCGTTCAGTTAGATGCAACGAACAAATATGCAATGCCATATAGATTCTTGACTCGTATTTCGTCTGGGTATCAAATGCACCATGGTATTGGTGCATGGCGTAGCGGTTCTGGTTGGACTGGCGGCACTACTATTTCTTGTGGTAACAATGATGGTGGTCCAGATAGACATTTCAGATTCAACAATGATGGTTACATCGAGTTCTGGGTTACTGACTCACAAAACACAGCAACACTTCGTGGTAATATCACAGGCAACGCAGCTACGGCAACTTGGGCTGATACAGTTGACGTTAACACTAGTACTTCTACGAGCTTCTATGGGCTTGTTTGGCATTCAGGCGATACATTGTATGCATCTGAAAACCAAGGTCTTACAGTTCGTCCGAGCGACGGATTTACTAAGATCAAACATGGTTACCTTGGCAACGAGCGTTTGTCTCACGACACGACTGGTAGAATTGTAGCAAGGAATACGGCAGGTCGTCGTGCTGGTATGTACGGAACATATGACTCAAATAAAATTGCTCATATTTGGTCGATGGGTACCTCGTACATGATTGACGATAGTGGTGCAACGTTTGGTAACTTATATGGTCTAGCTTACAAGCATACGAACAACACTACTGGTGGTACAATGGCTGGCGGTCATCAAATGGTTTGGTGTGCTAACGGTACTGGCAAATCTGCTATGGGTGACAACATATGGACGAGCGGTAACGTAACTGCGTATTCGGATATTCGAGTTAAGACAAACATTGAGAGAATTCAAAACCCTCTTGATAAAATCTCTAAAATTGGTGGTTATACGTATGACCGTACTGATCAAGATTGTGCTCGACAAACGGGTGTCATTGCTCAAGAAATTCTTGAAGTTCTACCTGAAGCTGTAACTGGCGGTCCGACTGAAGATGATCCAGAAGGTCATTACTCAGTTGCATATGGTAACATTGTCGGTCTATTGATCGAGGGTATCAAAGAAGAGAAACGCAAGCGCGAAGCTCTTGAAGAACGTATTGCAAGACTTGAGGCACTACTAAGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
1f5a3a8238d63bc0b997ec727dbcb3747dc19f4a674c10c35e09bf91c2b94159
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,6247
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequence of Vibrio natriegens Bacteriophage QD01 Zhu,L. and Zhu,D. 2015-12 — GenBank