Protein

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Genbank accession
AWY09329.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MADKFKQYPDTLSSPFTNGLDVVPDDDNDLAMTSRGLYLDAPGTVRVMLEGGYVTTYESLVVGVHHPIRVKRVYETGTSPDAKIKAVY
Physico‐chemical
properties
protein length:88 AA
molecular weight: 9694,85290 Da
isoelectric point:5,12156
aromaticity:0,09091
hydropathy:-0,27386

Domains

Domains [InterPro]
DC_0304
STR
1–88
DC_0304
IPR061180
Unmapped
3–79
IPR061180
AWY09329.1
1 88
Architecture
STR
STR 1-88
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Ruegeria phage vB_RpoS-V10
[NCBI] 		2218616 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Ruegeria pomeroyi DSS-3
[NCBI] 		246200 Bacteria > Proteobacteria > Alphaproteobacteria > Rhodobacterales > Rhodobacteraceae > Ruegeria

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AWY09329.1 [NCBI]
Genbank nucleotide accession
MH015255.1 [NCBI]
CDS location
range 132057 -> 132323
strand +
CDS
ATGGCAGATAAGTTCAAGCAGTATCCAGACACATTGTCAAGCCCATTCACCAATGGACTTGATGTTGTTCCTGACGACGACAACGATCTCGCGATGACATCCCGCGGCCTCTACCTCGACGCCCCCGGAACCGTTCGCGTGATGCTCGAAGGTGGGTACGTTACGACATACGAATCTCTCGTCGTGGGAGTACACCACCCCATCCGCGTCAAGCGCGTGTATGAAACTGGGACGTCTCCGGATGCGAAGATCAAGGCTGTGTACTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
c653f1c2e4826d727a64d92bc037f6d653df9a86fb3bcd3c5cbcb4e845721c0c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8378
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Diverse roseophage infecting Ruegeria pomeroyi DSS-3 Zhan,Y., Chen,F., Wommack,E. and Nasko,D. 2018-09-27 — GenBank