Protein

View in Explore
Genbank accession
CBR26917.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MTRIVSPFSCEQVACATALSSLVMASKSPLGDFSFTSDIVKNRTYTTDKEQTLYSSLLDGNHSIIGTWEGELVRDNLALSIKGERGQDRGVVISTHYNLKKYQRTKESSQIITRIHATSRFKQEGQDRETELQVTVDSPLINSYPFINEVTYTNNNLRSRQELIEWASSKFRLEGIDKPKDAIIIEAFELDGQTVHLGDTVTLKSKLHGIDVRKKAVAYDYDPLAKNYRSITFDDKTGIGTGKTGGSITTLANNLLDGNKRSEDVAVEIALENANRAFDAEFEKRQVAIDNAIEQAQSRGEVYTDRLKASIDSELSTIHQQMRQQEEEQQRTTRELLVKAGVNINLATEAKLKAEQAQTGATEALRRAEQAKLEAIQEANRLTSTERSQTETKIATAKSQAISEASRLVDVAKSLLSGQLATVSSSLSQTKEDLKLLASKQLVDSLTGRVTGAESMIQVQADQISQRVKTSDFNQVKHRIETAESSITQLGNRITTEIRETIAKIPVDFGGRNYILKSDTYITSGSKYLDSASDFIDYAQAGKFVTISVDIKGENLSPDEGGQSRIGCELRLTLSNGNPLYLNCYKVVSATQPRERIYRTVRIPDGVSVVSVARLNLFVQVRGNALAGRPKFELSSMPTDWSPAPEDLITDLSQTRTLITQTAEGQTQLSTKVIHTETKMMNAETQIRQLLGDVASKVSKMDFDNLKSTVENHTTSINQTSQSILLKADKTFVDGVKSTAETALSKATSNATMISQTKSELTIANNAISQKVAKTDFNSLTGRVASAETTIRTQAGQIEQRLTSTQVESAINSKGYQTKSQVDSNITGRGYLTSSSLQPYATTTSVQNLVRTTSDSFTQRISQTESRIPTSVSHRNLIAGTSDRWSAYQTINVSSNWIASLGRVQFGDSSGIYVGSKVHLYVHVSADEITFDPAVTTRSMKLQGPILDNQNSWTWTNWNLYHPFYNKWSSNLTTGNNYRLIKLTATVTQEMYQHSKGFELQVRIDGVKTGKFHVRALMVSTGDIFPDYWTPSLEDFTTLTAFHEVRDTVSSHTRTIGDHTNQISQVVQTATGIVTRVGNLETSRATTAAVNAIQTQVSTLAGSWSVRNLTSAGTVLSQLNLNKDGTVKIDGKLVQITGTTYIQDGVIASGKIASLDARKITTGIISAARIGAEAITADKLKVDQAFFTKFMATEAYLKQLFAKSAFITQVQSVTLSANKISGGILSAINGAMKINLSLGNIKFFTNSPSISREVSGYPHQWVSFETGTSNGKPCGVTIIGSNRWNNWNANDGGFVGIRAWNGTDTDQIDVVGDKVRLASAPYTNPDGWEIVTLPNRLSIDAFKASDRPSSILNIGDIRIYRNGTTYVSLKDVLHQFNHNFKHLVNITGRGDVILTWDTIK
Physico‐chemical
properties
protein length:1400 AA
molecular weight: 153856,73580 Da
isoelectric point:8,75921
aromaticity:0,06500
hydropathy:-0,36986

Domains

Domains [InterPro]
DC_1274
ATT
1–550
DC_1274 DC_1955 IPR012892
IPR007119
Unmapped
5–234
IPR007119 Coil Coil DC_0171
IPR010572
ENZ
39–236
IPR010572
CBR26917.1
1 1400
Architecture
ATT
STR
RBD
ATT 1-550 | STR 654-716 | RBD 717-1398 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage phi-SsUD.1
[NCBI] 		861448 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptococcus suis
[NCBI] 		1307 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CBR26917.1 [NCBI]
Genbank nucleotide accession
FN997652 [NCBI]
CDS location
range 44368 -> 48570
strand +
CDS
ATGACTAGAATTGTTTCTCCTTTTTCTTGTGAACAAGTTGCCTGTGCAACAGCTCTCTCTTCTCTAGTCATGGCGAGCAAGTCTCCACTGGGAGATTTTTCTTTTACCAGCGACATTGTCAAGAACAGAACCTATACAACAGATAAGGAACAGACGCTATACTCCAGCCTGTTGGATGGCAACCATTCTATTATTGGTACTTGGGAGGGGGAGTTGGTTCGAGATAACCTTGCCCTTTCAATAAAGGGTGAGCGTGGACAAGACCGTGGGGTAGTCATCTCTACTCACTACAATTTGAAAAAGTATCAGAGAACAAAAGAAAGTTCACAGATTATCACTCGAATCCATGCCACTTCAAGGTTTAAACAAGAGGGGCAGGATAGGGAAACTGAACTTCAAGTCACAGTAGACAGTCCACTGATAAACTCCTATCCTTTCATCAATGAGGTGACCTATACCAATAATAACCTCAGATCTCGTCAAGAGTTAATAGAGTGGGCCAGTAGCAAGTTTCGCTTAGAGGGAATTGATAAGCCAAAAGATGCCATCATCATTGAGGCATTTGAGTTAGATGGTCAAACGGTTCATCTAGGCGATACAGTGACTTTAAAAAGCAAGCTACACGGTATTGATGTGAGGAAGAAAGCCGTCGCTTATGATTATGATCCTTTAGCTAAGAATTACCGCTCTATCACATTTGATGATAAGACAGGTATTGGTACAGGTAAAACTGGCGGAAGCATAACTACACTAGCAAATAATCTCCTTGATGGGAATAAGCGGAGTGAGGATGTTGCCGTTGAAATTGCCCTTGAGAATGCCAACAGAGCCTTTGATGCGGAATTTGAGAAACGTCAAGTAGCCATTGATAACGCTATCGAACAGGCTCAAAGTCGTGGGGAGGTCTACACGGATCGATTAAAGGCCAGCATTGACAGTGAACTTTCAACTATTCACCAACAGATGCGACAACAGGAAGAGGAGCAGCAACGCACAACTCGTGAATTATTGGTGAAGGCTGGTGTAAATATCAACTTAGCAACAGAAGCAAAACTGAAGGCAGAACAGGCTCAAACTGGGGCAACTGAAGCCCTCAGAAGGGCAGAACAAGCCAAGCTTGAAGCCATTCAAGAAGCTAACCGATTGACTTCAACGGAGCGTAGTCAGACAGAGACAAAGATTGCGACAGCTAAATCACAAGCTATCTCTGAAGCTAGTCGTTTGGTTGATGTAGCAAAATCACTGTTGAGTGGACAGTTGGCTACTGTAAGTTCAAGTCTCTCGCAAACCAAGGAGGATTTAAAACTTCTTGCGAGTAAGCAACTTGTAGATAGTCTGACTGGTCGAGTAACCGGTGCAGAATCCATGATTCAAGTGCAAGCAGATCAAATTTCCCAGCGTGTAAAAACCAGTGATTTTAACCAAGTGAAACATAGAATCGAAACTGCCGAGTCGTCTATTACGCAATTGGGGAATCGGATAACGACTGAGATTCGAGAGACCATAGCTAAGATTCCAGTTGATTTTGGTGGTCGAAATTACATACTAAAAAGTGATACTTATATTACATCTGGGAGTAAGTATCTAGATAGTGCTTCGGACTTTATCGACTATGCTCAGGCGGGGAAGTTTGTGACGATTAGCGTTGATATCAAGGGGGAAAATCTGTCGCCTGATGAAGGAGGACAGTCTAGGATAGGATGCGAGCTACGCTTGACTTTATCCAATGGCAATCCTCTCTATCTAAACTGCTATAAAGTTGTTTCAGCAACCCAACCTCGCGAGCGGATATACCGAACGGTTCGTATTCCTGATGGTGTATCGGTTGTTAGTGTAGCAAGGCTCAATCTTTTTGTGCAAGTCAGAGGAAATGCCTTAGCTGGAAGACCAAAGTTTGAACTTTCTTCTATGCCTACAGACTGGTCACCTGCTCCTGAGGACTTAATCACAGATCTTAGCCAAACCAGAACGCTAATTACTCAGACAGCTGAGGGACAAACTCAACTGTCTACAAAGGTTATTCATACTGAGACTAAAATGATGAATGCTGAAACCCAAATCAGGCAATTGTTGGGTGATGTGGCTAGTAAAGTTTCAAAAATGGACTTTGACAATCTCAAGAGTACAGTTGAGAATCATACGACAAGTATTAATCAAACGTCCCAGTCCATTTTACTTAAAGCTGACAAGACCTTTGTGGACGGTGTGAAATCTACGGCGGAAACCGCCCTTTCAAAAGCAACTAGCAATGCGACAATGATTAGTCAGACCAAGTCTGAGCTGACTATTGCCAATAATGCCATTTCACAGAAAGTCGCAAAGACAGATTTTAATAGCTTGACTGGTCGAGTAGCAAGTGCGGAAACCACTATCCGAACACAGGCTGGGCAAATCGAACAACGACTGACGAGTACGCAAGTTGAATCTGCAATTAACTCAAAAGGCTACCAAACCAAGTCTCAGGTTGATTCAAATATTACGGGTCGTGGTTATCTTACAAGCAGCTCTCTACAACCCTATGCGACGACAACTAGTGTGCAGAATTTGGTTAGAACCACCTCTGATAGTTTTACCCAGCGAATCAGTCAAACGGAAAGCAGAATCCCTACCTCAGTTTCGCATCGCAACTTGATAGCTGGTACTTCGGATAGATGGAGTGCTTATCAGACGATAAATGTGAGTAGTAACTGGATAGCATCATTAGGAAGAGTTCAATTTGGAGATAGTAGTGGTATCTATGTTGGATCAAAAGTTCATTTATATGTTCATGTCTCAGCGGATGAGATTACATTTGACCCTGCGGTGACGACTCGTTCTATGAAACTCCAAGGTCCAATCTTAGATAATCAAAATTCTTGGACATGGACCAACTGGAATTTGTATCACCCTTTCTACAATAAGTGGAGCAGTAATCTGACAACAGGTAACAACTATCGCTTGATAAAATTGACCGCTACCGTCACTCAAGAGATGTACCAACACTCTAAAGGTTTTGAACTTCAAGTCAGAATCGATGGAGTTAAAACTGGTAAGTTCCATGTGAGAGCCTTAATGGTTTCAACTGGTGATATCTTTCCAGACTATTGGACACCATCGTTAGAAGACTTTACGACTTTAACCGCATTTCATGAAGTGCGGGATACTGTAAGCAGTCACACTCGAACAATTGGAGATCACACCAATCAAATCAGTCAGGTTGTTCAAACGGCTACTGGGATTGTGACACGAGTTGGCAATCTAGAAACAAGTCGAGCGACAACGGCTGCCGTCAATGCCATTCAAACTCAAGTTTCAACTCTTGCAGGGTCGTGGTCGGTTCGAAATCTGACCAGTGCAGGCACAGTTTTGAGCCAACTTAATCTCAATAAGGATGGGACGGTCAAAATCGATGGAAAACTCGTCCAAATTACAGGCACTACCTATATCCAAGATGGTGTCATTGCGAGTGGTAAGATTGCCAGTCTTGATGCACGCAAGATTACGACAGGTATTATCTCTGCAGCTCGAATTGGAGCAGAAGCAATCACCGCGGATAAACTAAAGGTTGACCAAGCATTCTTTACCAAGTTTATGGCTACAGAAGCCTATCTCAAGCAGTTGTTTGCCAAATCAGCCTTTATAACCCAAGTGCAGTCAGTAACCCTATCTGCCAACAAAATTTCTGGTGGTATCTTGTCAGCAATCAACGGAGCTATGAAAATCAATTTATCACTTGGAAACATCAAATTCTTTACAAACTCTCCATCCATTTCTCGTGAGGTTAGTGGCTATCCCCACCAATGGGTTTCATTTGAAACAGGTACCTCAAACGGTAAGCCATGTGGTGTAACCATTATCGGTTCCAATCGATGGAACAACTGGAATGCCAATGACGGTGGTTTTGTAGGAATTCGAGCATGGAACGGTACAGATACCGACCAAATTGATGTGGTAGGTGATAAGGTACGTTTAGCTAGTGCTCCATATACCAATCCAGATGGCTGGGAAATAGTAACGTTGCCTAACCGACTGAGTATTGATGCCTTTAAAGCATCTGATCGACCAAGTTCAATTTTGAATATCGGAGATATCCGCATCTATCGAAACGGTACAACCTACGTCAGTTTGAAAGATGTTCTCCATCAATTCAACCACAATTTTAAACACTTAGTAAACATCACAGGTCGAGGTGATGTCATCTTGACATGGGATACGATTAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
50a57b3a86555b234f668f27539fc30cfc5f5b86e1d7e806c6928840cbcebedc
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5804
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Different Genetic Elements Carrying the tet(W) Gene in Two Human Clinical Isolates of Streptococcus suis Palmieri,C., Princivalli,M.S., Brenciani,A., Varaldo,P.E. and Facinelli,B. 2011 21115784 GenBank