Protein

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Genbank accession
QYW06275.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MFGECCPFVVPKVLMRASYVTSSGSSIKQTLVANNVAQTILFNQVTVADPALSIDLVTGEVTALKDFSGMASLAATALREQTGSGEVEWGVFIEGFDAVNGWQPYPGSLRPVTMSSQTTNEKRTIDYTLAVEVLAGTKFRWRHYTTNASRQISIVSFAAANGLPSSAGAIMSFWGVKP
Physico‐chemical
properties
protein length:178 AA
molecular weight: 19064,50600 Da
isoelectric point:6,56873
aromaticity:0,09551
hydropathy:0,14438

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Shewanella phage vB_SspM_MuM16-2
[NCBI] 		2866685 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Shewanella sp. M16
[NCBI] 		2830837 Pseudomonadota > Gammaproteobacteria > Alteromonadales > Shewanellaceae > Shewanella >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QYW06275.1 [NCBI]
Genbank nucleotide accession
MZ568828.1 [NCBI]
CDS location
range 19597 -> 20133
strand +
CDS
ATGTTTGGTGAATGCTGTCCGTTCGTTGTCCCAAAAGTGTTGATGCGTGCCAGTTATGTCACGTCTTCTGGCAGCAGTATTAAACAAACACTGGTTGCTAATAATGTGGCGCAAACCATTTTGTTTAATCAAGTCACGGTGGCAGATCCAGCTTTAAGCATTGATCTAGTGACAGGAGAAGTCACCGCATTAAAGGATTTTAGCGGTATGGCGAGCTTAGCGGCCACGGCCCTACGTGAGCAGACGGGTTCAGGTGAAGTTGAGTGGGGCGTATTTATTGAAGGGTTTGATGCAGTTAATGGATGGCAACCTTATCCAGGTTCATTAAGGCCCGTCACCATGAGTTCTCAAACAACTAATGAAAAACGCACCATTGATTACACCTTAGCTGTAGAAGTTTTGGCAGGAACTAAGTTTCGCTGGCGTCACTATACAACCAATGCTAGCCGTCAAATATCAATAGTGTCCTTTGCGGCAGCGAATGGTTTACCCAGTTCAGCGGGTGCCATCATGAGTTTTTGGGGTGTTAAACCCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
7a21bbbe7d79b27c1b6b888965bdcb37914bd009e418ff37b11e4f029b861455
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8932
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Identification, Characterization, and Genomic Analysis of Novel Shewanella Virulent Phage from a Gold Mine Bujak,K., Decewicz,P. and Radlinska,M. 2020-09-13 — GenBank