Protein

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Genbank accession
AGS82143.2 [GenBank]
Protein name
putative adhesin
RBP type
TSP
Evidence RBPdetect2
Probability 0,57
Protein sequence
MLSLIPRLAPWPLVRGDLRSYPTLLSKTAFSAVPTTGLSGSIVQLSHLTYKPETGKLFVPLLHSDRTGRLAVYDVAGNSLTQAVSFAAMGGTGVLRPGAHHTLSRTASGAASGKVPAVVTWGTTSTPSGIGVGLFNETASAIEGFTTSAASIVSNQSNLNLQASIIMNAAGDVGLVQYIDGPDSTRYLKYRKVVYDQAQGKLVVGTGAQEFVGQQQPAVARYYKDSLFVVCGLASSGKAFAQLLDVSGDAPVLVDSAPALKASSLAWGKASIDVVGDNLVITYLDATGDLNAELFALSSTSITRKSTQPLGGFTTSSGVRDSIVLGDTVFALIVTGNSVDVAKTTIGAQGVTRFTVDRNVMTLDATYTQAYMAKISDTRLLFVKAGTTGAMQYQFVDYVWRVDLTPSKVLAQYRFYDGEAINEVGERFALLGSGATVGNGRLNTTTNTTSRIEQDQVYFGPDDDLTIEAIVKATSSGSNGYSPICQWNVGGSNNNSWAMSVVSGLLRFSWSSSGSASSTYLTSNTPVPTGIETHVAVVRKNGVFRLYVAGQQQNETSVDATANALNTRPVSTSWSDTTGWLNGSRGNIRISREALYDGDFQPPTELPTITRPTYSEQDQAACVFQLDLRRDNLLDEVTDNQVTFVNGTALTNGRIVTVNNTTSQYTCQSKKFGEGDFTAELMINLQAVSATYGAVIMGNWRAGGVASDENRWCIILDSNRNIGFNMARSADANDFAWMMSSTPVPLNVDCHIVAERVNGVVTLYLNGSQVAQSNETDFNFPIRGGEAGWKVHSISSQVAYTVGMRCWNLRIMDKAYYNGDVKRENEFPALSVKEYVIVNGAYLHPDFSLQGGATQTEVGVDMTAGKYILGTGSPKYVFYRGDFTVEATVTPRSLVYGTGAGSGSAIVPLWACHTWAAPGQPVNWELFLNLGTNQIAFGTSHSDSTLSRTMPYTFTLGQRINFKVVRRRSQMYAFVDDTLVGVTDMPYNIGYDITQPPFIGRRRGGGSGEVNWWNDVLLEKFIITKRAKM
Physico‐chemical
properties
protein length:1029 AA
molecular weight: 110765,22020 Da
isoelectric point:6,26783
aromaticity:0,09329
hydropathy:-0,08581

Domains

Domains [InterPro]
IPR013320
STR
410–597
IPR013320 G3DSA:2.60.120.200 IPR013320
G3DSA:2.60.120.200
STR
429–601
G3DSA:2.60.120.200 IPR013320
PF13385
LEC
455–595
PF13385 PF13385
DC_2085
STR
566–818
DC_2085
AGS82143.2
1 1029
Architecture
STR
STR
STR 410-824 | STR 879-1017 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AGS82143.2
1 1029
Domain Start End Length (AA) Confidence
N-terminal 1 52 52 0,5184
Central domain 53 264 213 0,5063
C-terminal 265 1029 764 0,3238
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-52
Central
53-264
C-terminal
265-1029

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage PaBG
[NCBI] 		1335230 Uroviricota > Caudoviricetes > Baikalvirus >
Host Pseudomonas aeruginosa PAO1
[NCBI] 		208964 Bacteria > Proteobacteria > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AGS82143.2 [NCBI]
Genbank nucleotide accession
KF147891 [NCBI]
CDS location
range 223921 -> 227010
strand +
CDS
ATGCTTAGCCTGATTCCAAGACTAGCTCCATGGCCGCTAGTACGCGGAGACCTACGGAGTTATCCGACCCTACTAAGCAAGACTGCGTTTTCCGCAGTGCCGACAACTGGCCTGTCTGGCAGCATAGTCCAGCTAAGTCACTTGACGTACAAGCCCGAGACTGGCAAGCTATTCGTTCCACTGCTGCACAGTGATCGGACTGGACGGCTGGCTGTTTATGACGTAGCCGGGAACTCGCTCACGCAAGCAGTGTCTTTTGCCGCAATGGGAGGCACAGGAGTGCTTCGTCCAGGCGCCCACCACACACTGAGCAGAACTGCCAGCGGGGCAGCATCCGGTAAAGTACCTGCAGTGGTCACATGGGGCACAACATCGACACCCTCTGGTATCGGTGTAGGTCTTTTCAACGAGACAGCCTCCGCCATCGAAGGGTTTACGACGTCCGCCGCGAGCATCGTCAGCAACCAGTCAAACTTGAACTTGCAAGCGTCAATCATCATGAATGCCGCTGGTGACGTAGGGCTTGTGCAGTACATCGACGGACCAGACAGCACTCGCTATCTGAAATACAGGAAGGTCGTATACGATCAAGCCCAGGGCAAGCTAGTCGTCGGCACTGGCGCCCAAGAATTTGTAGGTCAGCAGCAGCCTGCAGTCGCCCGATACTACAAGGATTCCTTGTTTGTTGTGTGCGGGCTTGCCAGCTCAGGCAAAGCATTTGCGCAACTGCTCGATGTGTCTGGTGATGCTCCAGTACTGGTAGACTCCGCACCTGCGCTTAAGGCGAGTTCTCTAGCCTGGGGAAAAGCATCTATCGATGTCGTTGGGGACAATTTGGTCATCACGTATCTGGATGCAACTGGTGACCTTAACGCGGAGCTGTTCGCACTCTCCTCAACTTCCATTACGCGCAAGTCCACACAACCGCTGGGAGGCTTCACGACCTCCTCAGGTGTGCGCGATAGTATCGTTCTAGGTGACACTGTATTCGCTCTGATCGTAACTGGCAACTCAGTAGACGTGGCGAAAACAACGATCGGTGCGCAAGGCGTAACGCGCTTCACCGTTGACCGTAACGTCATGACGTTGGATGCCACGTATACGCAGGCGTACATGGCAAAGATCAGCGACACTCGATTGCTGTTCGTCAAAGCTGGCACCACCGGGGCGATGCAATACCAGTTTGTCGATTACGTGTGGCGTGTCGATCTGACTCCGTCCAAGGTGCTGGCCCAGTATCGGTTCTACGACGGTGAAGCCATCAACGAAGTCGGCGAACGCTTCGCTCTGCTGGGCTCTGGCGCTACAGTCGGCAATGGCCGCCTAAACACCACAACCAACACGACTTCGCGCATCGAGCAAGACCAGGTCTATTTCGGGCCTGACGATGATCTGACGATAGAGGCGATTGTAAAAGCAACGTCTTCCGGCAGTAACGGGTACTCTCCGATCTGCCAGTGGAACGTAGGCGGCTCCAACAATAACTCCTGGGCCATGTCTGTCGTTAGCGGGCTCCTTCGCTTCTCGTGGTCTTCCAGTGGGTCTGCATCATCAACATACCTAACGTCAAACACGCCCGTCCCAACTGGCATCGAAACACACGTCGCGGTTGTTCGGAAAAACGGCGTGTTCCGACTGTACGTGGCTGGGCAGCAGCAAAACGAAACTTCGGTCGACGCTACCGCTAACGCATTGAACACCAGACCAGTGTCCACGAGCTGGTCAGACACGACCGGTTGGTTGAACGGGTCACGAGGCAACATTCGGATCAGCCGCGAAGCGCTGTATGACGGAGATTTCCAACCTCCGACAGAACTGCCGACGATCACTCGTCCGACATACAGCGAACAAGATCAGGCTGCGTGTGTTTTCCAATTGGATTTGCGCCGCGACAATCTGTTGGACGAGGTTACGGACAACCAAGTCACGTTCGTCAACGGTACCGCCCTGACGAATGGACGCATCGTCACGGTAAACAATACGACTTCGCAGTACACCTGCCAGAGCAAGAAGTTCGGTGAGGGTGATTTCACGGCTGAGCTGATGATCAACCTGCAAGCTGTCAGCGCAACGTACGGTGCTGTGATCATGGGCAACTGGCGTGCAGGCGGTGTAGCCAGTGACGAGAACCGTTGGTGCATCATCCTGGACAGTAATCGCAACATTGGCTTCAACATGGCCAGATCGGCCGACGCCAACGACTTCGCTTGGATGATGTCCTCGACGCCTGTTCCATTGAACGTGGACTGCCACATTGTAGCGGAGCGCGTAAATGGAGTCGTGACTCTCTACCTGAACGGCAGCCAGGTGGCGCAATCCAACGAGACTGATTTCAACTTCCCAATCCGCGGAGGTGAAGCCGGTTGGAAGGTGCACAGTATCAGTTCTCAGGTTGCGTACACCGTGGGAATGCGCTGCTGGAATCTGCGCATCATGGACAAAGCCTACTACAATGGCGATGTCAAGCGCGAGAATGAATTCCCAGCGCTGTCTGTGAAAGAGTACGTCATAGTCAACGGCGCCTATCTGCACCCGGACTTCTCCCTGCAGGGTGGCGCTACTCAAACGGAAGTTGGCGTTGATATGACCGCTGGCAAATACATCTTGGGTACAGGATCGCCCAAGTATGTGTTCTACCGAGGCGATTTCACAGTCGAAGCAACGGTCACACCACGTAGCTTGGTCTACGGTACTGGTGCAGGTTCCGGTTCTGCTATAGTCCCTCTGTGGGCGTGCCATACCTGGGCTGCTCCTGGGCAGCCAGTGAACTGGGAACTATTCTTGAACTTAGGAACGAACCAGATTGCGTTCGGCACTTCCCATTCTGACTCTACGCTCAGTCGAACAATGCCTTACACATTCACTCTTGGCCAGCGCATAAACTTCAAGGTGGTGCGCCGCCGCAGTCAGATGTATGCCTTTGTGGACGACACGCTCGTAGGTGTGACCGACATGCCCTACAACATCGGATATGACATAACACAGCCTCCGTTCATCGGACGCCGACGTGGTGGCGGTAGTGGTGAAGTGAATTGGTGGAACGACGTTCTTCTGGAGAAATTCATTATCACCAAGCGCGCCAAGATGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
4594b57569fc7bac234d390d61f00e2a27e197b7ef48a5ea8a1821e6e989dd31
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,5116
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50