Protein

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Genbank accession
AWY09173.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,62
TF
Evidence RBPdetect2
Probability 0,57
Protein sequence
MASSIGRIALGVVGALIGAPFGLSAIGFSIGSAIGGALFAPDGPKTEGPRLGDTNVSASSLGKVITEHYGVTRSSGNMIWSAGLKEVKVTEKQGGGKGGGGGATSTTYEYYASFATVFGRGPGTEVRKIWADGKIIYDATGESETNNEKYRFRFYSGGPNQVIDPLIQESVNRRLAGLPDVNEGNQEQADYQSLSDVISSAYASGDARSALYGDLLTVRKASAEAVEGIPDYRFTPAYRGLCFILFDDMPLEDFGNRIPNLTAEIVWDGATANNGSTTPGEIPTITGTAVTEISNLAVPSGLMAIDYNNEKLFGLSGDVMRRFGSDSNAEDRQATVGTPTPTVLVGTPTSVEEYGIAIDRLLAVGSEGTVYAAATLSYTNFFGGTISTNSLLALSGTGLTIIGPVIDPILPSATLRFGTHLRMSGSLPASLIFGGTGGTTGEHMAFVDTADTIHAMRLNSGDLQATSSITSAVDGTHTNNGPLVAGASISSGVTQFFHCAYAGNRVKIVRYEVTNNAIKQGWLPTDSDEINVVEKKSSSLTLTLTSNINRVSALVWNSTTDDLIMIATLNSGSTAVLRVDEDLAVDYLEEIAAAGPLETSGLSRSDTSNGTLAYASARDIIAISVADGTHIRYVNALAANASSAAQFYNGTNGSLLLWEGDAPYIYRVGRSSGASRGHDIADLLPRVIQDVCERAGMLPDEFDVSGLSDLAVRGYSISRPSTGRQVMENLLQAYFADGIETDWKVVFADRDTNSVRTIDEAELGEIGGPTGPVNWLESRTPEYEIPAEININYSDPMRDYQTGTAHKKRISNPIPSMYSDSTQNLELPMVLRDSEAMDIAERLLYLSWMSRDRSKAMLNWTHADLDPGDVISVRFKDGRVITDRISKATIGANFEIEIESARSGDPVYASAPQTIIPTGSIPSNNISTPVNSRVFVLDIPLLYDYHDTSRSASRFYTAVGADSDKWRSATIYGSWDNGTFLSFANAAVDATWGTTTTKVQPPRSLWTTDRDNEIRVALSIDNGDLVSITREQLINGANRALIWNPSTGVGEIIQFQNAAIDGSTYVLTGLVRGLRGTEYAVDKHSNGAYFILLQDSVLTLSDNELSRIGTTGYFKAVSAGQLISAVGSSTTTFRGNDLKPWAPSRVRRTDDGTDITVTWNRRTRVGGAWNMLTTYETVALSEDFEQYEVYLLPAGGAAQDAFDPSNPATYHTMTSVTGATSCVFSGAVLSAHGYTVDDTINVALYQISGQVGRGFARIGGLAP
Physico‐chemical
properties
protein length:1263 AA
molecular weight: 134709,32240 Da
isoelectric point:4,77524
aromaticity:0,08076
hydropathy:-0,14260

Domains

Domains [InterPro]
DC_1879
ATT
1–318
DC_1879 IPR032876 IPR056490 DC_0263
DC_2254
STR
748–990
DC_2254
AWY09173.1
1 1263
Architecture
ATT
ATT
STR
RBD
ATT 1-318 | ATT 718-874 | STR 875-990 | RBD 991-1263
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AWY09173.1
1 1263
Domain Start End Length (AA) Confidence
N-terminal 1 305 305 0,6950
Central domain 306 504 200 0,6556
C-terminal 505 1263 758 0,2001
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-305
Central
306-504
C-terminal
505-1263

Taxonomy

  Name Taxonomy ID Lineage
Phage Ruegeria phage vB_RpoS-V10
[NCBI] 		2218616 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Ruegeria pomeroyi DSS-3
[NCBI] 		246200 Bacteria > Proteobacteria > Alphaproteobacteria > Rhodobacterales > Rhodobacteraceae > Ruegeria

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AWY09173.1 [NCBI]
Genbank nucleotide accession
MH015255 [NCBI]
CDS location
range 44660 -> 48451
strand +
CDS
ATGGCCTCTAGTATTGGTCGCATTGCCCTTGGCGTCGTCGGGGCACTCATCGGGGCACCGTTTGGTCTTTCGGCTATCGGTTTCTCTATCGGCTCTGCAATTGGTGGGGCACTCTTCGCCCCTGATGGGCCGAAGACGGAAGGCCCTCGCCTTGGTGATACGAACGTCTCTGCATCAAGTCTCGGAAAGGTCATCACGGAACACTATGGTGTAACTCGGTCTTCCGGGAACATGATCTGGTCCGCAGGACTCAAGGAAGTAAAGGTCACCGAAAAGCAGGGCGGCGGCAAGGGTGGCGGTGGCGGGGCAACCAGCACCACATACGAATACTATGCGTCGTTCGCGACAGTATTCGGACGTGGTCCCGGAACTGAGGTTCGGAAGATTTGGGCTGACGGTAAGATCATCTACGACGCAACCGGGGAAAGCGAAACAAACAACGAGAAGTACCGGTTCCGCTTCTACTCAGGAGGGCCAAATCAGGTAATCGATCCTCTTATTCAGGAATCTGTTAACCGCCGCCTCGCAGGGCTTCCTGATGTCAACGAAGGAAATCAGGAACAGGCTGACTACCAGTCGCTCTCTGATGTGATCTCTTCGGCATACGCCTCAGGCGATGCACGCTCCGCACTCTATGGTGATCTTCTCACTGTTCGCAAGGCATCGGCAGAGGCAGTGGAGGGAATTCCTGACTACCGGTTTACCCCCGCATACCGTGGACTGTGCTTCATCCTGTTCGACGACATGCCCTTGGAAGATTTCGGTAATCGCATCCCGAACCTCACGGCGGAAATCGTCTGGGATGGGGCAACTGCGAACAACGGATCGACGACGCCGGGTGAGATTCCTACCATCACAGGTACCGCAGTAACCGAGATCAGTAATCTCGCTGTTCCCAGCGGACTTATGGCGATTGACTACAACAACGAGAAGCTGTTCGGACTCTCCGGTGACGTCATGCGCCGGTTCGGTTCTGACAGCAACGCAGAAGATCGGCAGGCCACTGTAGGTACACCGACCCCAACTGTTCTTGTGGGAACACCTACCTCTGTAGAGGAATATGGAATCGCCATCGACCGCCTGCTCGCGGTTGGATCAGAGGGAACAGTATATGCTGCGGCAACCCTGTCCTACACCAACTTCTTCGGCGGAACCATCTCAACCAATTCGCTTTTGGCATTGTCTGGCACCGGACTCACAATCATCGGGCCTGTAATCGACCCTATTCTTCCGTCCGCTACCCTCAGGTTTGGGACACATCTTCGCATGTCTGGATCACTCCCGGCAAGTCTGATCTTTGGCGGCACTGGCGGCACGACCGGGGAGCATATGGCTTTCGTCGACACCGCTGACACAATTCACGCCATGCGCCTCAACAGCGGCGATCTTCAGGCGACGTCTAGCATCACATCTGCGGTGGATGGGACACACACAAACAATGGGCCTTTGGTCGCTGGGGCATCTATCTCTTCTGGGGTGACCCAGTTCTTCCACTGTGCATACGCTGGGAACCGGGTAAAGATCGTTCGTTACGAGGTGACCAATAATGCGATCAAGCAGGGGTGGCTTCCCACAGATTCTGATGAGATCAATGTGGTGGAGAAGAAGTCCAGCTCTCTCACGCTCACCCTTACCAGCAACATCAACCGGGTGTCGGCGCTCGTATGGAATAGCACAACAGACGATCTTATCATGATCGCGACACTCAACAGCGGAAGTACCGCAGTCCTGCGCGTGGACGAAGACCTCGCCGTGGATTACCTTGAGGAAATCGCGGCTGCTGGCCCTCTTGAAACCAGTGGATTGTCTCGGTCGGATACATCAAACGGAACGCTGGCGTACGCATCAGCGCGTGACATTATCGCCATCAGTGTTGCTGATGGGACACACATTCGGTATGTCAACGCCCTCGCCGCTAATGCAAGCTCTGCAGCGCAGTTCTACAACGGAACCAATGGAAGTCTTCTTCTCTGGGAAGGAGATGCTCCATACATCTACCGTGTCGGACGGTCCAGCGGAGCCAGCCGTGGGCACGACATCGCTGATCTTCTCCCGCGCGTTATTCAGGACGTCTGCGAACGCGCAGGCATGCTCCCTGACGAGTTCGATGTTTCAGGACTGTCCGATCTCGCAGTTCGTGGCTACAGTATCAGCCGTCCATCGACTGGGCGTCAGGTAATGGAGAATCTTCTTCAGGCATACTTTGCTGATGGTATCGAGACAGACTGGAAGGTGGTATTCGCAGACCGTGACACGAATTCCGTACGCACGATTGATGAGGCTGAGCTTGGCGAGATCGGCGGACCGACAGGACCGGTAAACTGGCTTGAGAGCCGTACACCTGAATACGAGATTCCGGCTGAGATCAACATCAACTACTCTGATCCAATGCGTGACTACCAGACAGGCACTGCCCACAAGAAGCGCATCAGCAACCCGATCCCTTCGATGTATTCTGACAGCACACAGAACCTTGAGCTTCCTATGGTGCTCCGGGATTCCGAAGCGATGGATATTGCAGAGCGTCTTCTGTACCTTAGCTGGATGAGCCGTGATCGCTCTAAGGCGATGCTCAACTGGACCCACGCAGACCTCGATCCGGGTGACGTCATTTCTGTGCGCTTCAAGGATGGTCGTGTCATCACTGACCGTATTTCGAAGGCCACCATCGGAGCGAACTTCGAAATTGAAATCGAAAGTGCACGCTCTGGCGATCCTGTATACGCGTCCGCGCCACAGACCATCATCCCCACAGGAAGCATCCCTAGCAACAATATCTCGACACCGGTAAACAGCCGTGTGTTCGTTCTCGATATTCCGCTTCTCTATGACTACCACGACACGTCACGTAGCGCGTCTCGGTTCTATACAGCGGTCGGGGCGGATTCCGATAAGTGGCGTTCTGCGACCATTTATGGTTCGTGGGACAACGGCACGTTCTTGTCGTTCGCCAACGCTGCAGTGGATGCAACGTGGGGCACCACCACGACCAAGGTGCAGCCGCCGCGCTCCCTCTGGACCACGGATCGCGACAATGAAATTAGGGTCGCGCTTTCCATCGACAACGGTGACCTCGTATCCATTACGCGCGAGCAGTTGATCAATGGGGCTAACCGTGCCCTGATCTGGAACCCAAGCACAGGTGTTGGAGAAATCATCCAGTTCCAGAATGCAGCTATTGATGGTTCCACTTATGTCCTGACAGGCCTCGTGCGCGGTCTTCGTGGCACAGAATACGCCGTGGATAAGCATTCGAATGGTGCCTACTTCATCCTTCTGCAGGACTCGGTACTCACCCTCAGTGACAACGAACTCTCCCGCATCGGTACCACGGGTTACTTCAAGGCCGTATCTGCAGGTCAGCTCATTTCCGCAGTCGGATCATCTACCACAACTTTCCGCGGCAACGACCTCAAGCCGTGGGCACCATCACGTGTTCGTCGCACCGATGATGGGACGGACATCACTGTCACGTGGAACCGCCGCACTCGCGTCGGTGGTGCATGGAACATGCTCACCACTTACGAGACTGTGGCGCTCAGCGAAGACTTTGAACAGTACGAAGTCTACCTGCTTCCTGCCGGTGGTGCTGCGCAGGATGCGTTCGATCCGTCCAATCCTGCCACATACCACACGATGACATCGGTAACAGGTGCTACCTCTTGCGTATTCAGCGGCGCTGTTTTGTCGGCGCACGGGTACACGGTTGATGATACGATCAACGTCGCCCTTTACCAGATCAGCGGACAGGTCGGACGCGGCTTCGCTCGCATCGGCGGGCTTGCCCCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
19ddda2bc7dae169c5fc474c70bf8958b573f3a101c1d9f5c00bc587ed29fdc6
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2867
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Diverse roseophage infecting Ruegeria pomeroyi DSS-3 Zhan,Y., Chen,F., Wommack,E. and Nasko,D. 2018-09-27 — GenBank