Protein

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Genbank accession
CCP51199.1 [GenBank]
Protein name
putative endolysin
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MTAKPGNARFALAASADFNGSIDAVSVSQVLSLAAFRSADGAWWEIAEPVVNVLAFGARPDNATNAGPSFQEALDYIAAVGYNRELYIPPVGTYLFTSGVTIGDGSAQRLALTIRGGGSGTRLVHSADKALFTILGDCTEFIARDFEVWAGVDQNDPTKGVFYIPNGLSRSSFYDIQGQQNGPNTRLSSFFYSEAGVPMDEITFHNIVEVHNHTGFRLGAGSSVWFVGGRSVGNYPATVCTGLDIVGGMGGVFVWGTDFIINHYNARVRNLTGSTNREIFFSQSCFDGGFIGLYIEDESYVNIVGCWAASADQACIECSFSGNGGVLNISGGTVYNAGVVSLNAGDKIGVIFGGLGRIDMSGVTVRENRNRGIYLTNPARTQFSNIRANNFFGNGTTGTNPCDIFVSGAAVVENNTVTNGIIRGSGDTIIRNNVGDAATITTPTIPASGTPITNQTGRTVEVFISGGTVSQVTKRGVPVFSSSNVSLLLQPGDAIAVTYTAAPTWAWVLP
Physico‐chemical
properties
protein length:510 AA
molecular weight: 53695,29540 Da
isoelectric point:5,04033
aromaticity:0,10196
hydropathy:0,08784

Domains

Domains [InterPro]
IPR011050
STR
41–328
IPR011050 DC_1620
IPR011050
STR
50–328
IPR011050
IPR012334
STR
51–418
IPR012334
CCP51199.1
1 510
Architecture
STR
RBD
STR 41-418 | RBD 419-509 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
CCP51199.1
1 510
Domain Start End Length (AA) Confidence
N-terminal 1 65 65 0,9822
Central domain 66 435 371 0,9967
C-terminal 436 510 74 0,9833
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-65
Central
66-435
C-terminal
436-510

Taxonomy

  Name Taxonomy ID Lineage
Phage Brucella phage Tb
[NCBI] 		1133292 Uroviricota > Caudoviricetes > Perisivirus >
Host Brucella abortus S19
[NCBI] 		430066 Pseudomonadota > Alphaproteobacteria > Hyphomicrobiales > Brucellaceae > Brucella > Brucella abortus
Host Brucella abortus 544
[NCBI] 		1169205 Bacteria > Proteobacteria > Alphaproteobacteria > Rhizobiales > Brucellaceae > Brucella

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CCP51199.1 [NCBI]
Genbank nucleotide accession
HF569091 [NCBI]
CDS location
range 21660 -> 23192
strand +
CDS
ATGACGGCAAAACCAGGCAATGCGAGGTTTGCCCTTGCGGCATCGGCTGATTTTAACGGGAGCATAGATGCTGTTTCGGTGTCCCAGGTTTTGAGCCTCGCAGCATTCAGATCAGCCGATGGGGCTTGGTGGGAAATTGCTGAACCAGTTGTCAATGTATTGGCATTTGGTGCAAGGCCCGACAATGCGACAAACGCTGGGCCGTCGTTTCAGGAAGCCCTCGATTACATTGCAGCCGTTGGGTACAACCGTGAACTTTATATACCGCCTGTTGGCACATATTTGTTCACATCAGGTGTCACGATTGGTGACGGGTCCGCGCAGAGGCTAGCCCTCACTATTCGCGGAGGTGGCTCCGGAACTCGGTTGGTTCACAGCGCTGATAAAGCATTGTTCACAATACTAGGTGATTGCACAGAGTTTATAGCGCGTGATTTTGAGGTGTGGGCGGGGGTCGACCAAAATGATCCGACTAAGGGCGTCTTCTACATACCTAATGGCCTATCACGTTCATCGTTTTACGACATTCAGGGGCAGCAAAACGGGCCGAATACTCGATTGTCGTCATTCTTCTATAGTGAAGCTGGCGTACCTATGGATGAAATTACATTCCACAATATTGTGGAGGTTCATAATCACACTGGTTTTCGGCTAGGTGCCGGGTCGTCAGTGTGGTTCGTTGGGGGGAGGTCAGTCGGCAACTATCCTGCCACAGTATGCACAGGTCTTGATATAGTCGGCGGAATGGGTGGGGTATTTGTTTGGGGAACAGACTTCATTATCAACCATTATAACGCTCGGGTAAGAAACCTAACTGGTTCCACGAACCGCGAAATTTTCTTTTCTCAATCATGCTTTGATGGTGGATTTATCGGTCTATACATCGAAGACGAGAGCTATGTGAATATTGTTGGATGTTGGGCGGCGTCTGCCGACCAAGCTTGCATTGAATGCTCTTTCTCAGGAAACGGCGGTGTCTTGAACATCTCCGGCGGTACAGTCTATAACGCCGGAGTTGTATCACTTAATGCTGGAGACAAAATCGGCGTTATTTTCGGCGGCTTGGGACGTATTGATATGTCTGGGGTTACAGTACGTGAAAACCGCAACCGAGGGATATACTTGACAAATCCAGCAAGGACGCAGTTCTCTAACATTCGGGCGAATAATTTCTTTGGTAATGGTACAACAGGTACAAACCCATGCGATATATTCGTCAGTGGGGCAGCGGTTGTCGAAAATAACACTGTTACCAACGGGATTATACGTGGTTCGGGCGATACTATAATTAGAAATAATGTCGGGGATGCTGCGACTATAACAACACCGACTATACCCGCAAGCGGCACACCGATAACAAATCAAACGGGCCGTACCGTTGAAGTTTTCATATCTGGGGGGACGGTTTCGCAGGTAACTAAACGGGGCGTTCCTGTATTTTCTTCGTCAAACGTTAGTCTACTACTACAACCCGGCGATGCCATAGCGGTTACGTACACAGCGGCCCCAACATGGGCATGGGTGCTGCCTTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
3122cee2ce48f6deb869ea47a0f5a4c0467872bfa9eddc5bf37413820539286b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8684
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete nucleotide sequence of different virulent Brucella phage genomes Hammerl,J.A. and Hertwig,S. 2014-08-28 — GenBank