Protein

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Genbank accession
XOF08867.1 [GenBank]
Protein name
receptor binding tail protein
RBP type
TSP
Evidence DepoScope
Probability 0,96
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MSFFAGKFSDGKTVLSLTNSNGGDTGEHYSPGGNTIFHSDMPFVLVDGTYEAALGNAGNGYFVCQMPWDIINIKSNDPGRVILTAIEINGTHRGFLNGTQSQVGQFLSFFEDPPRAGAELGLTSAFAIGDSLAHGTYTYNGSLGHEESIARQGTGGTLAQASGFQIFRPGGVSAGEAISRAWSLMGFPTGVSSAPIDPNNQDYWDPNWTTPIGSAYKGHDHFYVCNSNIRGYVGKKKEIPSSTNLLYQSPAFPNWVYVCRGSTSNMAAQSPRAVYVQDWYNVTPTKVIWYVLNLRYSNGNMGVSGTPFTGSDILISPSNFTIKGVSLPNTGYKFINQNAFGNLGYRPDMEYIGNNTAYTGVFGDTTARCEFIGSSNGSLWSPVGYGGAASQISLYKFNAGKQWYVDTNTNSIGNEHGPVWSPSTVPLRLFPNNVASTYVGDDITPSYPGAGDYYQPLSTVWLGLPNAHSTIILTTEVIMGNINTAGQRISTYGGSAWQVQGRRQQSYTAGDAIFHQILTLPPGYLVPYHSTTSYSYTQTWASRPDEFAFRRNGYIYTIKNLGNGNVEFGVIIHAAEAAAIFLPRLRITVQRLT
Physico‐chemical
properties
protein length:593 AA
molecular weight: 64293,74640 Da
isoelectric point:6,45636
aromaticity:0,12816
hydropathy:-0,24182

Domains

Domains [InterPro]
IPR059609
RBD
1–593
IPR059609
XOF08867.1
1 593
Architecture
RBD
RBD 1-593
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XOF08867.1
1 593
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,4594
Central domain 11 224 215 0,9061
C-terminal 225 593 368 0,7596
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-224
C-terminal
225-593

Taxonomy

  Name Taxonomy ID Lineage
Phage Citrobacter phage CitS1
[NCBI] 		3390903 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Citrobacter freundii
[NCBI] 		546 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XOF08867.1 [NCBI]
Genbank nucleotide accession
PQ818762 [NCBI]
CDS location
range 100248 -> 102029
strand -
CDS
ATGAGTTTTTTCGCAGGAAAGTTTAGTGATGGTAAAACAGTATTATCACTGACGAATAGCAACGGTGGAGACACCGGTGAACACTATAGTCCTGGTGGTAACACAATATTTCACTCTGATATGCCCTTTGTTCTAGTAGATGGAACATATGAAGCGGCTCTAGGTAATGCAGGTAATGGTTACTTTGTTTGCCAGATGCCATGGGATATCATTAATATAAAATCTAATGATCCGGGTAGAGTTATTCTTACTGCTATTGAGATTAACGGAACGCACAGAGGATTTCTTAATGGTACGCAAAGTCAAGTTGGCCAATTTCTGTCCTTCTTTGAAGACCCTCCGCGTGCTGGTGCTGAGTTAGGATTGACATCTGCTTTTGCTATTGGTGATAGTCTAGCACACGGTACATATACCTATAATGGCTCCTTAGGTCATGAGGAATCTATCGCGCGCCAAGGTACTGGTGGTACTTTGGCCCAAGCATCTGGATTCCAAATATTTAGACCTGGCGGTGTTTCAGCAGGTGAAGCGATCTCTAGAGCTTGGAGTCTCATGGGTTTTCCAACAGGAGTTTCTTCGGCCCCTATAGATCCCAATAACCAAGATTATTGGGATCCTAACTGGACAACACCTATTGGCTCTGCATATAAGGGTCATGATCATTTTTATGTTTGTAACTCTAATATTAGAGGATATGTAGGTAAGAAAAAAGAAATACCTTCTAGTACAAATTTGTTATACCAATCTCCTGCTTTCCCTAATTGGGTATATGTATGTAGGGGTTCTACGTCTAACATGGCCGCTCAGTCACCTAGAGCAGTATACGTCCAGGATTGGTATAATGTTACTCCTACTAAAGTCATTTGGTATGTATTGAACCTACGTTACTCAAATGGTAATATGGGTGTTTCTGGGACTCCATTTACTGGTTCTGATATTCTTATATCTCCTTCAAACTTTACTATTAAAGGGGTTAGTCTACCTAATACAGGGTATAAGTTTATTAACCAGAATGCCTTCGGGAATCTAGGTTATCGCCCCGATATGGAATATATTGGTAATAACACCGCATACACTGGGGTTTTTGGTGATACAACCGCTCGGTGCGAATTTATAGGCTCTAGTAATGGAAGTCTATGGTCACCAGTAGGTTATGGAGGTGCTGCGTCCCAGATTAGTCTGTATAAGTTTAACGCAGGTAAACAATGGTACGTAGATACCAATACTAACAGTATTGGTAATGAACATGGTCCTGTATGGAGTCCTAGTACTGTACCTCTTAGATTATTCCCCAATAACGTTGCTAGTACGTATGTAGGAGATGATATTACTCCTTCGTATCCTGGAGCTGGTGACTATTATCAACCATTATCAACTGTTTGGTTGGGTCTACCAAATGCTCATTCTACTATTATACTAACTACTGAAGTTATTATGGGTAATATTAATACCGCTGGACAGCGTATTAGTACTTATGGGGGTAGTGCCTGGCAGGTGCAAGGGAGAAGACAACAGAGTTATACTGCTGGTGATGCTATATTCCATCAGATTCTTACTCTGCCACCTGGCTATCTAGTACCATATCACAGTACAACTTCCTATAGCTATACCCAAACGTGGGCTAGTAGGCCTGATGAGTTTGCTTTCCGTAGGAACGGATATATTTATACTATTAAAAACCTTGGTAACGGTAACGTTGAGTTTGGTGTTATTATACATGCAGCTGAAGCAGCAGCTATATTCTTACCAAGACTACGTATAACCGTGCAACGCCTGACCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
32265440bf1a8b2a8261f7721b1cc8d79aadedb6b346367610d2b1ac5a1e889c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,2545
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50