Protein

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Genbank accession
ATN93411.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MAKNYIDEYGGRVDGTDPNMPFGKPRNRIGGISGTGTPLSGAWVQDFWGWMQDLLVRANMTPNGQPEEVGNCQLRTALTIEIVKQTMIAASYDMLGDGNWEAGKTFTTQAQFLVTSDGLAYKALPNTTLPYTVGATPDLAFVTPINSQVDLTHIEARIDGIDDEISSALTLIANNTDELQSAEARLTTRIDDANSDLQALSTYAQGVKADSDGNIQATIQLETRVVNAEGTAQAATTLAQNAQSTADGAVSANNLLEARVTANEGDISANASFIQSVDAKADGAISANTTLETRVDAQDLRINGLDTDISAASSLAQDAKATADGAVTTSNNLKSQIDHPSTGLNAISSVATSAKTTADGAASAVTSMESRVTDAENDAAASLTLSTDINTELDDIRSKAILSVDSNGNAAFIELGATPTESKITFKADSFELKDGSNVKRLSYNTTDNRWEFKGTIFAENIEGDVAEIKNISVAAFEVGGNFLPTKIYPVCTWKVAAQPFKRTLKITGLSFKSDATNNSNYYWMRIQRKSGSNWVNHGIGTYIYNYTGAYSGQRKQSFDLYVDISANSSYEMRYVVDTTNSVFGADFDAQPVTITVYKESDGITDFAAA
Physico‐chemical
properties
protein length:610 AA
molecular weight: 65131,97120 Da
isoelectric point:4,46222
aromaticity:0,07377
hydropathy:-0,29508

Domains

Domains [InterPro]
DC_0934
STR
1–607
DC_0934
SSF57997
STR
173–372
SSF57997
ATN93411.1
1 610
Architecture
STR
STR 1-607 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudoalteromonas phage J2-1_QLiu-2017
[NCBI] 		3117586 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudoalteromonas phenolica
[NCBI] 		161398 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Alteromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ATN93411.1 [NCBI]
Genbank nucleotide accession
MF988720.1 [NCBI]
CDS location
range 40796 -> 42628
strand +
CDS
ATGGCAAAGAATTACATTGATGAATACGGAGGTCGTGTTGACGGTACAGATCCTAATATGCCCTTCGGAAAACCACGTAACAGAATAGGTGGGATATCAGGAACAGGTACTCCTCTGTCAGGAGCTTGGGTACAAGACTTCTGGGGTTGGATGCAAGACTTATTAGTAAGAGCTAATATGACACCTAATGGACAACCAGAAGAGGTTGGAAACTGTCAGCTTAGAACCGCCCTTACTATTGAAATTGTTAAACAAACAATGATCGCAGCAAGTTACGATATGCTTGGGGACGGTAACTGGGAAGCAGGAAAGACTTTCACCACACAAGCACAGTTCTTAGTGACCTCTGACGGGCTTGCTTACAAAGCACTACCGAACACCACCCTACCTTATACAGTAGGTGCTACTCCAGACCTAGCTTTCGTAACTCCTATCAACTCTCAAGTAGATTTGACGCATATTGAGGCTCGTATTGATGGTATTGATGATGAGATATCGTCTGCTTTAACATTAATAGCAAACAACACAGACGAACTTCAATCAGCAGAAGCTAGACTTACAACAAGAATAGATGATGCTAATAGTGATTTACAAGCACTATCAACATACGCCCAAGGGGTGAAAGCAGACAGTGATGGTAACATTCAAGCAACTATTCAGTTAGAAACTAGGGTTGTTAATGCAGAGGGTACGGCACAAGCAGCAACCACATTAGCACAAAACGCCCAATCAACAGCAGACGGTGCAGTTAGTGCTAATAACCTCTTAGAAGCTCGTGTAACAGCTAATGAAGGAGATATCTCTGCTAATGCTAGTTTTATACAAAGTGTCGATGCTAAAGCAGACGGAGCTATATCAGCAAACACCACGTTAGAAACAAGAGTAGATGCACAAGACCTTAGAATTAATGGTTTGGATACAGACATTAGTGCTGCATCAAGTTTGGCACAGGACGCTAAGGCAACCGCTGATGGTGCAGTTACTACCTCTAACAATCTTAAAAGCCAAATAGACCACCCTAGCACAGGACTTAATGCTATATCTTCTGTTGCTACTAGCGCAAAGACTACAGCAGATGGGGCGGCTAGTGCAGTAACTTCTATGGAAAGCAGGGTTACTGACGCAGAGAATGACGCAGCAGCATCTCTTACGTTGTCCACAGATATTAACACTGAACTAGATGATATTAGATCTAAAGCTATTCTTAGTGTAGATAGTAATGGTAATGCTGCCTTTATTGAATTAGGCGCAACACCAACAGAATCTAAAATCACATTCAAAGCTGATAGTTTTGAACTGAAAGATGGTAGCAATGTTAAACGACTTTCTTATAACACAACAGATAATCGTTGGGAGTTTAAAGGTACTATTTTTGCTGAGAATATAGAAGGGGATGTTGCAGAGATTAAAAATATTTCTGTTGCCGCTTTCGAAGTTGGTGGTAACTTCTTGCCCACTAAGATATACCCTGTTTGTACTTGGAAAGTAGCAGCCCAGCCTTTTAAGAGAACTTTGAAAATTACAGGATTAAGTTTCAAGTCAGATGCTACTAATAATAGTAACTACTACTGGATGCGTATTCAGCGCAAGAGTGGTAGTAATTGGGTTAATCACGGAATAGGAACATACATCTACAATTATACAGGTGCTTACTCAGGACAAAGAAAACAAAGCTTTGACCTTTATGTAGATATAAGCGCAAACTCTAGCTATGAGATGCGCTATGTAGTAGATACCACAAACTCTGTGTTTGGTGCTGACTTTGATGCACAACCTGTAACAATCACTGTATACAAAGAGAGTGATGGTATAACTGATTTCGCAGCAGCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
84cb3bb5212d0bdfa832665e0665f6f9772d78816ca250c5f2bb3a36421d30f4
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7023
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genomic Sequence of BacteriophageJ2-1: A Novel Pseudoalteromonas phenolica Phage Isolated from the Coastal Water of Qingdao, China Liu,Q. 2018-06 — GenBank