Protein

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UniProt accession
H6SUI0 [UniProt]
Protein name
RnlA RNA ligase 1 and tail fiber attachment catalyst
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
Protein sequence
MNYLELKNMAENLKDSNYRSTKLNNFKFYTYILSDYKNFKENNTFFIRGLMIDSKSILNKDTLAPGISIPMPKFFNINENEDWLLPDSANLEDFTIVTKYDGSLMIPYEYDGIKFRTKMSIDNDQTKLANKYIKNNPDILDLIKNNPDTQYFFELISPLNRIVVDYNKTELKLIAELDLRTLEFKIHETNEFNFKDLNIKTLKDLKDYINTISNYEGVILQHKVTKKVYKLKTQEYLDLHNTVTNLDLKSIYKMILEETIDDAISKLSPEAVAYIDSVSNSVKVKLNEILDSIDSNYIKAKDLETPALYIKDLNIDPIAKDCLFKLCKNKLNLDNVLDQVKKSMLKYNKLRDIKVFLKL
Physico‐chemical
properties
protein length:359 AA
molecular weight: 42017,99230 Da
isoelectric point:6,39026
aromaticity:0,10306
hydropathy:-0,41727

Domains

Domains [InterPro]
IPR019039
STR
48–235
IPR019039
H6SUI0
1 359
Architecture
STR
STR 48-235 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Campylobacter virus IBB35
[NCBI] 		1006972 Uroviricota > Caudoviricetes > Connertonviridae >
Host Campylobacter
[NCBI] 		194 Bacteria > Proteobacteria > delta/epsilon subdivisions > Epsilonproteobacteria > Campylobacterales > Campylobacteraceae
Host Campylobacter coli
[NCBI] 		195 cellular organisms > Bacteria > Pseudomonadati > Campylobacterota > Epsilonproteobacteria > Campylobacterales
Host Campylobacter jejuni
[NCBI] 		197 cellular organisms > Bacteria > Pseudomonadati > Campylobacterota > Epsilonproteobacteria > Campylobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AEF56811.1 [NCBI]
Genbank nucleotide accession
HM246722 [NCBI]
CDS location
range 7247 -> 8326
strand -
CDS
ATGAATTATTTAGAACTTAAAAATATGGCAGAGAATTTAAAAGATTCTAATTATAGATCAACAAAATTAAATAATTTTAAATTCTATACTTATATATTATCAGATTATAAAAACTTCAAAGAAAATAACACCTTTTTCATAAGAGGTTTAATGATAGATTCTAAATCTATATTAAACAAAGATACTTTAGCACCTGGTATATCAATACCAATGCCAAAATTCTTTAATATTAATGAAAATGAAGATTGGTTATTGCCAGATTCTGCAAATCTTGAAGATTTCACTATAGTGACAAAATACGATGGTTCTTTAATGATACCTTATGAATATGATGGTATAAAATTTAGAACTAAAATGTCTATTGACAATGATCAAACTAAATTAGCTAATAAGTATATCAAGAATAATCCAGATATATTAGATCTAATAAAAAATAATCCAGATACTCAGTACTTTTTTGAGTTGATTTCACCTTTAAATAGAATAGTAGTAGATTATAATAAAACTGAATTAAAATTGATAGCTGAATTAGATCTTAGAACATTAGAATTTAAAATTCACGAAACCAACGAGTTTAATTTTAAAGATTTAAATATTAAGACGCTAAAAGATCTCAAAGATTATATAAACACCATATCTAATTACGAAGGTGTTATACTACAGCATAAAGTAACTAAAAAAGTCTACAAGTTAAAAACTCAAGAATATTTAGACTTACATAACACTGTAACTAATTTAGACTTAAAATCGATATACAAAATGATATTAGAAGAAACTATAGATGATGCAATATCAAAATTATCACCAGAAGCTGTAGCTTACATTGATTCTGTATCTAATTCAGTAAAAGTTAAGTTAAATGAAATATTAGATTCTATAGATTCTAATTACATTAAAGCTAAAGATCTTGAAACTCCAGCTTTATACATAAAAGATTTGAATATAGATCCTATAGCCAAAGATTGTTTATTTAAATTATGTAAAAATAAACTTAATTTAGACAACGTCTTAGATCAAGTTAAAAAATCTATGCTAAAATATAACAAATTACGAGATATTAAGGTTTTTTTAAAGCTATAA

Genome Context

Genome Context

Gene Ontology

Description Category Evidence (source)
GO:0016874 ligase activity Molecular Function IEA:UniProtKB-KW (UniProt)

Tertiary structure

PDB ID
7beb422c34a406f00bfef2d6d7a208c1de519614fd1e3e07d4fc71f6c714467c
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8215
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
— — 22284308 PubMed