Protein

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Genbank accession
YP_009817635.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MYRLLFNEYINIPTLALEQGDEIIFDILWRDDVDAYTKQYLFLSTTNSDNDHTAYITDSGVSTALISSPILTPDLFGLENGTRHQLKFTMAIGTAAGSIDRFFANSSGVNNFRGQIFSIQINAAAGNRLYEFQDGWENNPVIADSLGDGSTDGTLVKGLGAGWWPTTVADQLEVSNFQNIAVMESLDASIEVRNASLIAVVGEGVPNLLEVRNTQIIAVMEDFQEKQRKGNITDIYTEDIFRDPNLYDMAAYADRSMEKGEILWQHTLPITVTVFANAPFSTGVLASPAMAPIQIDVSVSGSVVGSFNWKLGDTDATIIWTNTLMIFKDDEVVFTVVEADSGASSITLNLIGAYV
Physico‐chemical
properties
protein length:355 AA
molecular weight: 38860,08750 Da
isoelectric point:4,17115
aromaticity:0,09859
hydropathy:0,04310

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.224.A._10N.261.48.B1
[NCBI] 		1881226 No lineage information
Host Vibrio breoganii
[NCBI] 		553239 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009817635.1 [NCBI]
Genbank nucleotide accession
NC_048124.1 [NCBI]
CDS location
range 20056 -> 21123
strand +
CDS
ATGTATCGCCTCCTCTTTAATGAATACATTAACATTCCCACCCTTGCCTTAGAGCAAGGGGACGAAATCATCTTTGACATACTATGGCGAGATGATGTCGATGCCTATACTAAGCAGTACCTGTTTCTAAGCACAACTAACAGTGATAATGACCATACGGCCTACATCACAGACAGTGGCGTAAGTACCGCCCTAATTTCATCTCCTATCCTCACCCCAGACCTGTTTGGATTGGAAAATGGTACAAGACATCAGCTCAAGTTCACAATGGCTATTGGGACAGCAGCAGGATCTATTGACCGTTTCTTTGCTAACAGTTCAGGGGTGAATAACTTCCGTGGGCAAATTTTCAGTATCCAGATTAATGCGGCGGCAGGTAATCGTTTGTATGAGTTCCAAGATGGATGGGAAAACAACCCTGTCATCGCTGACTCATTAGGAGATGGCTCTACAGATGGCACGTTAGTTAAGGGATTAGGAGCAGGATGGTGGCCTACCACTGTTGCAGACCAACTAGAGGTATCTAACTTCCAAAACATTGCCGTGATGGAGTCTTTGGATGCCAGCATTGAAGTCCGTAATGCCTCATTGATTGCCGTAGTAGGGGAGGGTGTCCCTAATCTCCTGGAGGTACGAAACACTCAAATAATTGCTGTCATGGAAGATTTCCAAGAGAAGCAACGCAAAGGCAACATCACCGACATTTACACCGAAGACATCTTCCGAGACCCTAACCTTTACGATATGGCAGCCTACGCTGATAGAAGTATGGAGAAGGGTGAGATACTTTGGCAACATACCTTACCAATTACTGTCACGGTGTTTGCGAATGCCCCATTTAGTACAGGGGTACTTGCTTCCCCTGCTATGGCACCTATACAGATAGACGTAAGTGTATCGGGTAGCGTAGTAGGTTCCTTTAACTGGAAACTAGGGGATACTGATGCAACGATTATATGGACAAACACTCTCATGATTTTCAAGGATGATGAGGTGGTATTTACAGTAGTGGAGGCAGATAGTGGAGCCTCATCTATTACCTTGAACTTAATAGGAGCGTATGTATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
9f15275d9d169535a186c73310f3fa5afd0639c378166160b5c979603c998dc0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6885
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank