Protein

View in Explore
Genbank accession
BDD79934.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MAGTLITITDAGRAALVAPGNTGTNAHQVVKIGLASAPFVADKGLLAMPNERKRITTFAGKNVAADMIHVTLKDDTDDQFTLYGFGLYLENDVLFGVYSQATPIMEKSPAAMLLLSADCQFTTIDAAALTFGEATFANPPATTEVQGVIELATQAEVDAGTDASRALTPKTAASRYAPLAGAIFTGPVRAPSLTVDDAAVMASATLKRTRQAVMSIDNFDGLTIEAADLTNTTKKPIALAPYGGKLLVGKLVDDGIGLVQVAGLVTAQTPAAGDVSKRLATTEWVVAAIASAAIGTLIIEPRTSVRAGCLKLNGVIVNRADYPALWAYAQASGALVTEAQWLAGAWGCFSTGDGATTFRVPELRGESLRFWDDARGVDVNRAIGTYQASQNLSHLHTATAAAVGDHVHTAWTDSQGWHWHHGNTYGVGDHAHYFNYPVPQSVADNDRGSTNSGFSVDSPVVPWTGNAGAHGHGFDTDGAGTHGHNVGIGNGGAHNHTITVAADGGTEARPRNIALLAMIRAY
Physico‐chemical
properties
protein length:522 AA
molecular weight: 54352,29820 Da
isoelectric point:5,66704
aromaticity:0,07088
hydropathy:0,01801

Domains

Domains [InterPro]
DC_0350
STR
112–522
DC_0350
SSF88874
STR
289–521
SSF88874
BDD79934.1
1 522
Architecture
STR
STR 112-522
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Burkholderia phage FLC10
[NCBI] 		2906468 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Burkholderia glumae
[NCBI] 		337 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
BDD79934.1 [NCBI]
Genbank nucleotide accession
LC667452 [NCBI]
CDS location
range 14064 -> 15632
strand +
CDS
ATGGCCGGCACTCTCATCACCATCACCGACGCGGGGCGCGCTGCGCTCGTCGCGCCCGGTAACACGGGCACGAACGCGCACCAAGTCGTAAAGATCGGCCTCGCCTCGGCCCCTTTCGTCGCTGACAAGGGCTTGCTCGCGATGCCGAACGAGCGCAAGCGCATCACGACTTTCGCCGGCAAGAACGTCGCGGCCGACATGATCCATGTGACGTTGAAAGACGACACCGACGATCAATTCACGTTGTACGGGTTCGGCCTGTATCTCGAAAACGATGTGCTGTTCGGCGTCTATAGCCAAGCGACGCCGATCATGGAGAAGTCGCCGGCCGCAATGCTGCTGCTGTCGGCCGACTGTCAATTCACGACTATCGACGCGGCGGCGCTCACGTTCGGCGAGGCGACTTTCGCGAACCCGCCGGCGACGACCGAAGTGCAAGGCGTGATCGAGCTGGCGACGCAAGCCGAAGTCGACGCCGGCACCGACGCATCGCGCGCGCTCACGCCGAAAACGGCCGCGAGCCGATACGCGCCCCTTGCCGGCGCGATCTTTACCGGCCCCGTACGCGCCCCTTCCCTGACGGTCGACGACGCGGCCGTGATGGCCTCGGCGACGCTCAAGCGCACGCGTCAAGCCGTCATGTCGATCGACAATTTCGACGGCCTCACGATCGAAGCGGCCGACCTGACGAACACGACGAAAAAGCCGATCGCGCTCGCGCCGTATGGCGGCAAGCTGCTCGTCGGCAAGCTCGTCGACGATGGCATCGGCCTCGTTCAAGTCGCCGGCCTCGTCACCGCTCAAACGCCGGCGGCCGGCGATGTATCGAAGCGCCTCGCAACGACTGAATGGGTAGTCGCCGCGATCGCATCGGCCGCGATCGGCACGCTCATCATTGAACCGCGCACAAGCGTTCGCGCCGGCTGTCTGAAACTGAATGGCGTAATCGTCAATCGCGCCGACTATCCCGCGCTATGGGCCTATGCACAGGCGAGCGGCGCACTCGTCACCGAGGCGCAATGGCTTGCCGGCGCGTGGGGCTGTTTCTCGACTGGCGACGGCGCGACGACCTTTCGCGTGCCCGAGCTGCGCGGCGAATCGCTGCGGTTTTGGGATGACGCGCGCGGCGTCGACGTGAATCGCGCGATTGGCACCTATCAGGCATCGCAAAACCTTTCGCACTTGCACACCGCGACCGCTGCGGCCGTGGGCGATCACGTTCATACCGCGTGGACTGATTCGCAGGGATGGCACTGGCACCACGGCAACACCTACGGCGTCGGCGATCACGCCCACTACTTCAATTACCCCGTTCCGCAATCCGTCGCCGACAACGACCGAGGGAGCACGAATAGCGGCTTTTCCGTCGATTCGCCTGTCGTGCCGTGGACTGGCAACGCCGGCGCGCACGGGCACGGTTTCGACACGGACGGAGCCGGCACGCACGGGCACAACGTCGGCATCGGCAACGGCGGCGCTCATAACCACACCATCACCGTCGCCGCTGATGGCGGCACCGAAGCACGGCCGCGAAATATCGCGTTGCTCGCAATGATTCGCGCTTATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0e1a68ae12416a8c3485f4245bba871fc384571d8158b6c886a1920e67c86836
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7837
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Optimal preservation method of new biocontrol agent Burkholderia jumbophages having a potential suppressing rice seedling rot disease Kanaizuka,A., Sasaki,R., Miyashita,S., Ando,S. and Takahashi,H. 2022-11-19 — GenBank