Protein

View in Explore
Genbank accession
XLQ29719.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,87
Protein sequence
MAANTPEQHVQAVYKAEQDINSTKNTNNSASTVKGENGFCILASVYNSASDQYIQNYQAIVFDAVPNIGVKRQADVTSYPVENGANVSDHVQVKNNTFSLSGMITETPVRLMRDMLYSAGVNGTRISQAITYLDKIFDERQPIILITEHKVYENVILKGISYEYQTEYAMQFDLEFEQVRLVSYGETNAIALKTQPNKNTGVKNKTNATGSKPDADLNKRAGQATGTEHLSNDSPDGK
Physico‐chemical
properties
protein length:238 AA
molecular weight: 26255,85860 Da
isoelectric point:5,42172
aromaticity:0,07563
hydropathy:-0,54622

Domains

Domains [InterPro]
DC_0628
STR
42–238
DC_0628
IPR048494
ATT
62–187
IPR048494
XLQ29719.1
1 238
Architecture
STR
ATT
STR
STR 42-61 | ATT 62-187 | STR 188-238
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage KKE7M
[NCBI] 		3366623 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XLQ29719.1 [NCBI]
Genbank nucleotide accession
PQ356295.1 [NCBI]
CDS location
range 35484 -> 36200
strand -
CDS
ATGGCAGCAAACACTCCAGAACAACACGTTCAAGCGGTTTATAAAGCGGAACAAGATATAAACTCTACAAAAAACACAAATAACTCTGCCTCTACTGTGAAAGGGGAGAATGGTTTTTGTATTTTAGCAAGTGTTTACAATAGTGCAAGTGATCAATATATTCAAAACTATCAAGCTATAGTTTTTGATGCTGTGCCAAATATCGGTGTAAAACGCCAAGCAGATGTTACTAGCTATCCTGTAGAAAATGGTGCTAATGTGTCCGATCACGTTCAAGTTAAAAATAATACTTTCTCTTTATCAGGGATGATTACAGAGACACCTGTAAGATTAATGCGAGATATGCTATATAGTGCTGGAGTTAACGGTACTCGTATCAGTCAAGCAATTACTTACTTAGATAAAATATTTGATGAAAGACAGCCTATCATTTTAATAACAGAACATAAGGTCTATGAGAATGTTATTTTGAAAGGCATATCATATGAATATCAAACAGAGTATGCAATGCAATTTGACTTGGAATTTGAACAGGTAAGATTAGTTTCTTACGGAGAAACCAACGCTATTGCACTTAAGACTCAACCAAATAAAAACACAGGTGTTAAGAACAAAACAAACGCAACAGGTAGCAAACCAGATGCTGATTTGAACAAACGAGCAGGACAAGCAACAGGCACTGAACATTTGAGTAATGACAGTCCAGACGGTAAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
7d5ea185e1d3fae57a3f4a5e4e1f3004866b6c401f58e68e8e7c71bdb8b3b349
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7145
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Escherichia coli phage Khan,R., Singh,S. and Kondabagil,K. 2019-06 — GenBank