Protein

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Genbank accession
XNL96036.1 [GenBank]
Protein name
membrane protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAYGIWTQPVGPGPATPAPLFIDSGSTFPQFKNSIRGSFNFNGAGRSFPISGWDGSGQIIIVPTGSLCWQWEVPPNLVPDVYCVNNIYVENASSFRVTLNQNPGSNPLFDCGFNVYQIWPRADRNYGITFSNTADYFSISDAGVVGQCIWAWQGVINNALQIPNIGGFNMTNAVVFANWSDGGLGLSYTSDDRVIRVYQNRPYVNGNTNEGGSVFARVAVFCNGAGVPEHNGGLNIYSPGTTQCVFSTNRTPFTVDAFIGSGGGNTGMSYPMIPLTSGIGAIKGQGSGWRYQQMRSHTMSGSSIGTGYGRYLFQWDQNYDLGADTVVNLSVPVINAAKVFAGL
Physico‐chemical
properties
protein length:343 AA
molecular weight: 36844,70770 Da
isoelectric point:5,61094
aromaticity:0,13120
hydropathy:-0,08426

Domains

Domains [InterPro]
DC_1434
ATT
1–40
DC_1434
IPR045604
STR
22–315
IPR045604
XNL96036.1
1 343
Architecture
ATT
STR
ATT 1-40 | STR 41-315 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XNL96036.1
1 343
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0313
Central domain 11 209 200 0,0088
C-terminal 210 343 133 0,9979
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-209
C-terminal
210-343

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage ev_rybdy3
[NCBI] 		3390212 Viruses >
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XNL96036.1 [NCBI]
Genbank nucleotide accession
PQ819470 [NCBI]
CDS location
range 67686 -> 68717
strand -
CDS
ATGGCATATGGAATATGGACGCAACCAGTAGGGCCGGGGCCAGCAACCCCCGCTCCTTTGTTTATTGATAGTGGAAGCACTTTCCCTCAGTTCAAGAATAGCATAAGAGGAAGTTTTAACTTTAATGGAGCTGGGAGATCTTTCCCTATTAGTGGATGGGATGGTAGTGGTCAGATAATTATTGTTCCCACTGGTTCTCTGTGCTGGCAATGGGAAGTCCCTCCTAACTTAGTCCCTGATGTTTATTGTGTAAATAACATCTATGTAGAAAATGCCTCATCTTTTAGGGTTACCCTGAACCAGAATCCTGGCAGTAACCCCCTGTTTGATTGTGGGTTCAACGTGTATCAAATTTGGCCTAGAGCTGATAGGAATTACGGAATCACTTTCTCAAATACAGCAGACTATTTTTCCATATCAGATGCTGGGGTTGTTGGTCAATGTATTTGGGCTTGGCAGGGGGTCATAAACAATGCCCTTCAGATACCAAATATCGGTGGGTTCAATATGACCAATGCTGTTGTATTTGCTAATTGGTCTGATGGAGGGCTCGGACTGTCTTATACCTCTGATGACAGAGTTATTCGTGTCTACCAGAACAGACCTTACGTAAACGGCAACACTAATGAGGGTGGTTCAGTGTTTGCTAGAGTTGCAGTATTCTGCAATGGGGCAGGGGTTCCGGAACATAATGGAGGTTTGAATATCTATTCTCCGGGTACCACTCAGTGTGTCTTCTCTACTAACAGAACACCTTTCACTGTAGATGCTTTTATAGGTTCAGGTGGTGGTAACACTGGAATGTCTTATCCTATGATACCTCTTACTTCTGGAATAGGTGCAATAAAAGGCCAAGGTAGTGGATGGAGATATCAGCAAATGAGATCTCACACAATGAGTGGCTCTAGCATAGGAACTGGCTATGGAAGGTATCTATTTCAGTGGGATCAAAATTACGATCTAGGAGCTGACACTGTAGTTAATTTATCAGTTCCTGTAATAAATGCAGCTAAGGTTTTTGCTGGACTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
2509646f71426d789d2c5fd16941a44f01cb94b0d8744656e03ada1e7b00bb03
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7777
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50