Protein

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Genbank accession
AFC22439.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MSIITLFTKKAPTIAGIEFDAILEDTIESSVEFTGYPIESGARAADHGIIQPYRWSLIVAVSNNPLKPQVTDFIGGALSNLTNNPLLASIAGTSAGLLAGSSDSRASAALQLLLALQMARESFDIDAGDIQLQNMVIVNIRRTKTPDNETGLFAEVQLQELPTLETIITRGTNPTANQLRDNDPSQSQLAALVNRGEQFARDVGATINEAVSNLL
Physico‐chemical
properties
protein length:215 AA
molecular weight: 22947,60780 Da
isoelectric point:4,48911
aromaticity:0,04651
hydropathy:0,01581

Domains

Domains [InterPro]
DC_0601
STR
1–214
DC_0601
IPR048494
ATT
19–166
IPR048494
AFC22439.1
1 215
Architecture
STR
ATT
STR
STR 1-18 | ATT 19-166 | STR 167-214 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage CP-T1
[NCBI] 		10689 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio cholerae
[NCBI] 		666 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AFC22439.1 [NCBI]
Genbank nucleotide accession
JQ177061.1 [NCBI]
CDS location
range 36082 -> 36729
strand +
CDS
ATGTCCATAATCACACTGTTTACTAAAAAAGCCCCTACAATAGCGGGTATTGAATTTGATGCGATATTAGAAGATACGATCGAATCATCCGTGGAGTTCACAGGTTACCCTATTGAAAGCGGCGCACGTGCTGCCGATCACGGTATTATCCAACCGTATCGTTGGTCGTTGATTGTGGCTGTATCGAACAATCCGCTAAAACCACAGGTGACGGATTTCATCGGTGGTGCGTTAAGTAATTTAACCAATAACCCACTATTGGCATCTATCGCGGGTACGTCTGCAGGCCTACTGGCGGGGTCAAGCGATAGCCGCGCAAGTGCTGCACTTCAACTATTACTTGCGCTACAAATGGCGCGTGAATCATTTGATATTGATGCGGGTGATATTCAATTACAGAATATGGTCATTGTGAATATTCGTCGAACCAAAACTCCTGATAACGAAACGGGTTTATTCGCTGAAGTACAATTACAGGAGTTACCCACATTAGAGACGATTATCACTAGGGGTACTAACCCTACAGCTAACCAATTGCGCGATAATGACCCGAGTCAATCGCAGTTGGCCGCACTGGTTAACCGAGGCGAACAATTCGCGCGCGATGTAGGTGCTACCATTAACGAGGCTGTGAGTAACCTATTATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
005ffec65627e7816adf3367c0340fc1fc2999a1bf2c7f389151a827b37ec29c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7745
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50