Protein

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Genbank accession
QGZ17770.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,88
Protein sequence
MSYIGKTPTVGNFIKLDAITTSSTNSYTLQHNSVNFSPESANHMLVSLNGVIQAPNTSYTVSGSTITFLPSSGTLSSSDSIDFIMVYGNVLDVGVATTVADSAITNAKTNFVSTSSSAGLQIKGDGTTDGTLQLNCSQNSHGIKLKSPAHSAGASYTLTFPTTDGNADQFLQSNGSGVLTWADAGGGGLVKLAETNISSGVSTVSFDGYFTSDYDFYKVMIVNLRPVGSSSYVPSLRFRRSNSDVTSNNYRGAVQQAFNGGSNHNGDFPSTLINMVKDSSVKGNSEFGFSAEIIFYNPLKSTRYRMVNGQGTYQYSTDRWYTCQFGGTDYSATSALSGFTFLNAGGENFDDGEIYLFGIKTS
Physico‐chemical
properties
protein length:362 AA
molecular weight: 38423,72250 Da
isoelectric point:5,28929
aromaticity:0,11050
hydropathy:-0,20856

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QGZ17770.1
1 362
Domain Start End Length (AA) Confidence
N-terminal 1 101 101 0,9822
Central domain 102 300 200 0,0312
C-terminal 301 362 61 0,9992
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-101
Central
102-300
C-terminal
301-362

Taxonomy

  Name Taxonomy ID Lineage
Phage Pelagibacter phage HTVC026P
[NCBI] 		2686456 No lineage information
Host Candidadtus Pelagibacter sp. HTCC1062
[NCBI] 		198252 Pseudomonadota > Alphaproteobacteria > Candidatus Pelagibacterales > Candidatus Pelagibacteraceae > Candidatus Pelagibacter >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QGZ17770.1 [NCBI]
Genbank nucleotide accession
MN698240.1 [NCBI]
CDS location
range 27206 -> 28294
strand +
CDS
ATGAGTTATATAGGAAAAACACCTACTGTAGGAAACTTTATTAAGCTAGATGCTATTACAACATCTAGTACGAACTCCTATACTCTACAACACAATTCAGTAAATTTTAGCCCTGAGAGTGCTAATCATATGTTAGTATCTCTTAATGGTGTAATCCAAGCACCAAATACTTCTTATACTGTATCAGGCTCAACAATTACTTTTTTACCATCATCAGGAACTTTATCATCTTCTGATAGTATTGACTTTATTATGGTATATGGAAATGTGCTTGACGTAGGGGTAGCGACCACAGTTGCAGATAGTGCAATTACAAATGCTAAAACAAATTTTGTATCAACATCATCATCTGCTGGATTACAAATAAAAGGCGATGGTACTACTGATGGAACTTTACAATTAAACTGTTCACAAAATAGTCATGGTATTAAATTAAAATCTCCAGCACATTCTGCTGGTGCTTCATACACTTTAACTTTTCCCACAACAGATGGAAACGCAGATCAATTTTTACAATCAAATGGTTCTGGTGTTTTAACTTGGGCTGATGCTGGTGGTGGTGGATTAGTTAAATTAGCAGAAACTAATATATCATCTGGTGTTTCAACAGTTTCTTTTGATGGATATTTTACAAGCGATTATGATTTTTATAAAGTTATGATTGTAAATTTAAGACCTGTTGGCTCTAGTAGTTATGTTCCATCTCTAAGATTTAGAAGAAGCAACTCTGATGTAACTTCTAATAATTATAGAGGTGCAGTTCAACAAGCATTTAATGGTGGCTCAAATCATAATGGAGATTTTCCAAGTACATTAATTAATATGGTTAAAGATAGTTCAGTTAAAGGTAACAGTGAATTTGGATTTAGTGCAGAAATAATTTTTTATAATCCATTAAAATCTACAAGATATAGAATGGTTAATGGACAAGGCACATATCAATATAGCACAGACAGATGGTACACTTGTCAATTTGGTGGCACAGACTATTCTGCAACATCTGCACTTTCTGGATTTACATTTTTAAATGCTGGTGGAGAAAATTTTGATGATGGAGAAATTTATTTATTTGGAATTAAAACAAGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d06a0ccad4b95f2116b635a39f85078904840149fe39d4fae56f97de9785df24
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7990
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Novel pelagiphages prevail in the ocean Zhang,Z., Qin,F., Chen,F., Chu,X., Luo,H., Zhang,R., Du,S., Tian,Z. and Zhao,Y. 2019 — GenBank