Protein
View in Explore- Genbank accession
- AOZ62003.1 [GenBank]
- Protein name
- tail fiber
- RBP type
-
TFTSP
- Protein sequence
-
MYNDEYTPLSPIRFQSALGSEIKRMYKEGENVVKLSLARVIKVNYRYNTVEVITTVHKNSTMKNPNDNGRYSARLPVTFGGKTPDGNVYGTNTLVTVGSLVLIGFLEGDKDNPIVLNIYGDVDNQSLLTRTNMTGADESDENIQRELWQLFTLYPSMTFKNIDGRGNQEVTFSGKSFMYITDTDPDNEYVQDQAFDYEDLPSSRYSNGELIEPVSAKSPTVLFVHQGIYDKHRVTFFLKSDGTLRIGSRHTDGKGITYQEMKPDGSYSIVQKHDTTNPEEKSSKYSKFELAENGDVIIKSLDHTLSITADGVLIDGKKLGSGGGGGGDLEIIKELQEKVEGVTTQITLINGKIETKIEKVEIEIDLDGIRQDQQKVLDAVRAALNKMTSLLKEAQDYMTIAFQDGTVTEEEKKKVTEYKNAIGREKTAIDEKYSQVISDPFLPATYKDLLAVAKENLDNRHAALNNAIEIAMLDGVVTPDERAAINQAYDGYNQSIAAMQTSFEQALAAILDARIKEAQENAMKYRDTEMRKIGSSITQLADSISQKVTSEQMSKQIEDVRSEMATKEEQKEIKDTAEQAKKDAEEALKKVPLRIMIGSTNGLIFRNKDIDSVIYVKVYKGEEEITMSIPKANFFWTRISDDADGDAAWELAHRGVGSSFQISDVDIPKRATFECDVDVPDS
- Physico‐chemical
properties -
protein length: 682 AA molecular weight: 76105,49260 Da isoelectric point: 4,89386 aromaticity: 0,07185 hydropathy: -0,53226
Domains
Domains [InterPro]
DC_0209
STR
12–681
STR
12–681
SSF69255
ATT
54–117
ATT
54–117
IPR029024
Unmapped
398–490
Unmapped
398–490
Coil
Unmapped
454–474
Unmapped
454–474
1
682
Architecture
STR 12-53 | ATT 54-117 | STR 118-681 |
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
682
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 117 | 117 | 0,7297 |
| Central domain | 118 | 612 | 496 | 0,2247 |
| C-terminal | 613 | 682 | 69 | 0,1056 |
Note: Constraints were applied during segmentation.
Fixed 40 C-terminal predictions appearing before Central domain
Fixed 40 C-terminal predictions appearing before Central domain
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-117
1-117
Central
118-612
118-612
C-terminal
613-682
613-682
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
Bacillus phage QCM8 [NCBI] |
1909403 | Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes |
| Host | No host information | ||
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
AOZ62003.1
[NCBI]
Genbank nucleotide accession
KX961630.1
[NCBI]
CDS location
range 52697 -> 54745
strand +
strand +
CDS
ATGTACAACGATGAATACACACCCCTGTCACCGATTCGGTTTCAGTCTGCGTTAGGATCGGAAATTAAACGTATGTACAAAGAGGGAGAGAACGTAGTAAAGCTCTCCCTTGCTAGGGTTATAAAAGTTAACTATAGGTACAATACAGTAGAGGTTATTACAACAGTACATAAAAACTCTACAATGAAAAACCCGAACGATAATGGTAGATACTCTGCACGACTACCTGTAACATTCGGAGGTAAGACACCTGACGGTAACGTTTACGGTACAAACACACTGGTCACTGTCGGTTCACTAGTACTAATTGGCTTCCTGGAAGGGGATAAGGATAATCCAATCGTCCTTAACATTTACGGAGATGTGGATAACCAATCACTACTGACTAGAACGAACATGACAGGTGCCGATGAATCGGACGAGAACATACAACGTGAACTATGGCAACTATTTACATTGTATCCGTCTATGACGTTTAAAAATATCGATGGACGAGGTAACCAAGAAGTAACGTTCTCAGGTAAGTCATTTATGTACATTACGGATACAGACCCCGATAATGAATACGTACAAGACCAGGCATTTGATTATGAGGATTTACCAAGCTCTCGTTATTCGAATGGAGAACTAATTGAGCCTGTATCGGCTAAGTCACCTACAGTACTATTCGTACATCAAGGTATTTATGACAAGCACAGGGTTACATTCTTCCTTAAATCTGATGGTACATTGCGTATAGGAAGTAGACATACGGATGGAAAAGGGATTACGTACCAGGAGATGAAACCTGATGGTTCATATTCTATCGTACAGAAACACGATACAACAAATCCTGAGGAGAAATCTTCGAAGTATTCTAAGTTTGAGCTTGCGGAGAATGGTGACGTAATTATTAAATCTCTTGACCATACACTGAGCATTACAGCGGACGGAGTTCTTATCGATGGTAAGAAATTAGGTTCAGGCGGTGGAGGTGGAGGAGACCTCGAAATAATTAAAGAATTACAAGAAAAAGTAGAGGGCGTAACCACTCAGATAACCTTAATTAATGGTAAAATAGAAACTAAGATAGAAAAAGTCGAGATTGAAATCGACTTGGACGGTATTAGACAAGACCAACAGAAAGTACTGGACGCAGTTAGGGCTGCATTAAACAAGATGACTTCGTTGTTAAAAGAAGCCCAGGACTACATGACGATCGCATTTCAGGATGGTACCGTTACAGAAGAGGAGAAGAAAAAGGTTACAGAGTACAAAAATGCTATTGGTAGGGAAAAAACTGCTATAGACGAAAAGTACAGCCAAGTTATTTCCGACCCCTTCTTACCTGCAACATACAAGGATTTACTTGCTGTAGCGAAAGAGAACTTGGATAACCGTCACGCTGCATTAAACAATGCTATTGAAATTGCGATGCTAGACGGAGTAGTCACTCCTGATGAACGAGCAGCAATTAATCAGGCGTATGACGGATACAACCAGTCAATCGCTGCAATGCAAACATCATTTGAACAGGCGTTAGCGGCAATTCTAGATGCGAGAATTAAAGAAGCACAAGAGAATGCGATGAAATACAGAGATACCGAGATGAGAAAAATCGGGTCTTCTATCACACAGCTTGCAGACTCTATTTCCCAAAAGGTTACCTCAGAGCAGATGTCAAAACAAATAGAAGACGTTCGTTCTGAAATGGCTACTAAGGAAGAACAGAAAGAGATTAAAGATACTGCGGAGCAAGCAAAGAAGGACGCAGAGGAAGCCTTAAAGAAGGTACCGCTTAGAATTATGATTGGTAGTACAAATGGTCTTATCTTCCGAAACAAAGATATAGACAGCGTTATTTACGTCAAGGTCTATAAAGGTGAAGAAGAGATTACAATGTCAATTCCAAAGGCTAACTTCTTTTGGACTCGTATATCTGATGATGCTGACGGAGATGCAGCGTGGGAATTAGCGCATAGAGGTGTAGGTAGCTCTTTCCAAATCTCAGATGTCGATATACCGAAGAGAGCGACTTTTGAATGTGACGTAGATGTACCTGACAGCTAA
Genome Context
Genome Context
Tertiary structure
PDB ID
62aa50e42917b53838fdb50326a57c6ab71eab7a6bc58099897b4b1ea1309bef
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50
Literature
| Title | Authors | Date | PMID | Source |
|---|---|---|---|---|
| Predicting Genome Terminus Sequences of Bacillus cereus-group Bacteriophage using Next Generation Sequencing data | Chung,C.-H., Walter,M.H., Yang,L., Chen,S.-C., Winston,V. and Thomas,M.A. | — | — | GenBank |