Protein

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Genbank accession
YP_010298932.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MVDLKQTPKQIAIDLINEANGTNYTISTISLGTPATNTTVINGLNTSITLSNGSSLQSLGVAVQYNRLSFKKLLARPYCQLEDLALSRLVDLIPYINQKYELALTSTDIVDGPYRPDDVAPGVRKITLSIADNHLVYTGDVTIYLGTQDAVYSYFNALQFMVAADYSTINYMGGHWTINGQTVVDVSRSLAQRNGITALYLSPTGKVIPSNSYKSTTNKLLARFRNNRLVEILGLNGETSYDNTGALLPKMPVVPSQLSAIPETLGITASLNAGVLSYNLTFDVTTKRAATGTVYYVDIKTGVDTNDGTTAATAFKTFKRALNALPAARVIRVKGYSDAYYDADSGWTQTIRNRTVDIVGYGDSNPVFTSSRQTTNWSGYDANTWYTSATDIATLVDKTVSSVTGYGRLLAKTSAVDCANTPHSFYVDNTNGRVYVHLSDNRKPDTNVYLIAKTLSGSVADSANVFMEKCNFDLSYNGFIADMTVPRAYGYLYMSQCTFGWTFKDPSFGSYGYNVAHQNCIAQFGFAGGFRYSTDRVLPSMNVKYWVIENRATVSYCGFDGNHTSSASRLASYGTILRINSTYTACDGNHVSDSGEGTFSLNIACQSTSVTNTLGNLSHYCVGTNSLNSAAAQYWSCKTDNSAFSFTPNSVGKIALFDTDIGSKPATQVLTPYQFIYTA
Physico‐chemical
properties
protein length:679 AA
molecular weight: 73838,75120 Da
isoelectric point:7,48879
aromaticity:0,10898
hydropathy:-0,14124

Domains

Domains [InterPro]
IPR057701
STR
1–149
IPR057701 IPR011050
DC_0675
STR
1–140
DC_0675 DC_1219
YP_010298932.1
1 679
Architecture
STR
STR
STR 1-149 | STR 287-667 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010298932.1
1 679
Domain Start End Length (AA) Confidence
N-terminal 1 312 312 0,9005
Central domain 313 668 357 0,9577
C-terminal 669 679 10 0,3073
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-312
Central
313-668
C-terminal
669-679

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage vB_KpM_FBKp24
[NCBI] 		2801834 Uroviricota > Caudoviricetes > Chimalliviridae > Maaswegvirus Kp24 >
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010298932.1 [NCBI]
Genbank nucleotide accession
NC_061421.1 [NCBI]
CDS location
range 210361 -> 212400
strand -
CDS
ATGGTTGATCTGAAACAGACCCCAAAACAGATCGCGATCGATCTGATTAATGAAGCGAACGGTACGAACTATACGATCTCCACAATCTCGTTAGGGACGCCCGCTACTAACACAACCGTGATTAATGGACTGAATACTTCCATAACGCTCTCCAACGGTTCTTCTTTGCAATCCTTAGGGGTTGCTGTACAATATAACCGCCTGAGCTTCAAGAAGCTTTTAGCGCGACCGTATTGCCAATTGGAAGACCTCGCGCTTTCACGTCTCGTTGACCTTATTCCTTACATCAACCAAAAATATGAACTGGCGTTGACCAGCACTGACATTGTTGACGGTCCTTATCGCCCGGATGACGTGGCCCCTGGTGTACGGAAAATTACACTTAGCATTGCTGATAACCATCTGGTTTATACGGGTGACGTAACTATCTATCTGGGTACGCAAGACGCGGTATATAGTTACTTTAATGCGTTGCAATTTATGGTCGCGGCGGATTACAGTACTATCAATTACATGGGCGGTCACTGGACAATTAACGGCCAGACAGTTGTCGATGTCTCCAGAAGCCTTGCACAACGAAACGGCATCACTGCGTTGTATTTGTCACCGACCGGTAAAGTCATTCCGAGTAACAGTTATAAAAGCACGACGAATAAACTCTTAGCGCGTTTTCGGAATAACCGTTTAGTGGAGATACTGGGATTAAATGGGGAAACGTCTTACGATAATACCGGCGCGCTATTGCCCAAAATGCCAGTAGTGCCATCTCAACTTTCTGCGATCCCGGAAACTTTAGGAATCACTGCGTCACTGAATGCGGGTGTTTTGAGCTACAACCTCACTTTTGATGTTACAACCAAACGCGCCGCGACAGGCACTGTCTATTATGTCGATATCAAAACCGGCGTAGATACTAACGACGGTACAACCGCAGCGACGGCGTTTAAAACATTTAAACGTGCGCTCAATGCGTTACCCGCCGCCCGCGTGATTCGTGTTAAGGGTTATAGCGATGCCTACTACGACGCCGATTCAGGTTGGACGCAAACAATCCGTAACCGGACAGTGGATATCGTAGGCTACGGAGACAGTAATCCTGTCTTTACCTCCAGTCGCCAAACCACTAACTGGTCGGGTTACGATGCGAATACCTGGTATACGTCAGCGACTGACATTGCCACGTTGGTAGATAAAACAGTTTCTTCGGTTACCGGGTACGGGAGACTATTAGCAAAAACATCCGCGGTGGATTGCGCGAATACTCCGCACTCTTTCTACGTTGACAATACCAACGGTCGAGTTTATGTCCATCTCTCGGATAATCGTAAGCCGGATACGAATGTTTACCTGATTGCTAAAACTCTGTCGGGTTCGGTCGCTGATAGTGCCAATGTGTTTATGGAGAAATGTAACTTCGATCTCTCCTACAACGGTTTCATTGCGGACATGACCGTCCCTCGCGCATACGGCTATCTTTACATGTCGCAGTGCACCTTTGGGTGGACATTTAAAGACCCGTCTTTCGGGAGTTATGGTTATAACGTCGCGCATCAGAATTGCATCGCTCAGTTTGGTTTCGCCGGTGGTTTCCGTTATTCTACCGACCGTGTACTCCCGTCCATGAATGTTAAGTACTGGGTTATTGAGAATCGTGCTACTGTCAGCTATTGCGGCTTTGATGGAAATCATACGTCCTCAGCATCGCGTTTGGCTTCTTACGGGACAATCCTCCGTATTAATTCGACGTACACCGCCTGTGACGGTAATCATGTCAGTGACTCCGGGGAAGGGACGTTCTCTCTTAACATCGCGTGCCAGTCTACTTCTGTAACGAACACACTCGGTAACCTTTCGCACTACTGCGTAGGGACAAACTCTCTTAATAGCGCAGCAGCACAATACTGGAGTTGTAAAACTGACAACAGCGCGTTTTCCTTTACACCGAATTCGGTAGGGAAGATTGCATTGTTCGACACGGATATTGGATCGAAACCGGCCACGCAAGTATTGACGCCGTACCAGTTTATTTATACCGCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
feafac8d8befdd1ed59bb6fb8d9ebfe1fdbdd1e89a167c722a277b76c122287f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6773
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic characterization of four novel bacteriophages infecting Klebsiella pneumoniae Estrada Bonilla,B., Costa,A.R., van Rossum,T., Hagedoorn,S., Wallinga,H., Xiao,M., Song,W., Haas,P.-J., Nobrega,F.L. and Brouns,S.J.J. 2021-03-02 — GenBank