Protein

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Genbank accession
XZE13101.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,79
Protein sequence
MALVIHYTRNEDGTFDVKRYRDNPMNFVVNHVPDGVPVRVFIDEIGEDNDVTEDFEALKENATFHIVESAGGGAIKGVMKIFSVVLKPLAKLLSPSVKGASSNLANSQADSPNNSLTDRNNKARPYERSYDICGTVQTIPNNLMTTYKVFNAAGKIVEYGYYDAGRGYLDIHPEDITDGDTRVSDITGTSVAVYAPYTSPNNTSTPQVMVGDPIEQGLYITVESNEVDGVVLKAPNGLGISFSYMSGYPSLSGNIGTIYDPTGGSDFSGVLVPNDTFSLVSAWTNTDVDLSGGGYQVLSVSEGTITFIVPGGLIGRWHEIRPGSFFRGDGEASLQPDNTYEKTLTDWVSINRTEVERIVANIAAANGMYKDNGKSKTLASVTAEIQYQLLDENSTPYGPIYTAQGTVSGRTPDYNGVTIYADLPVVSRVRVRARRVTDLDFNFEGSVVDEITYVNLYGQTRDNTPHYGNRTTVHSMRKQTPRAAEVKQPQLRMIATEMVHKYLGNGVFEDTMTPNTQAVQSLIRLARDPDVGGLNLTVRNMDKLLAVQNEVEAYFGDKQAGEFCYTFDDYKTTMQDIVSTIADAIFCTPYRRGADILLDFERPRMGPEMVFTHRSKAGTSEKWTRTFNDSQVFDSLKFSYIDPKTNVKETITIPETGGVKTETYDSKGIRNYKQAFWAANRRHQKNILKKISVSFTATEEGIFALPNRAISVVKGSRMATYDGYVTAVNGLTVELSQPVKFTSGDDHSLILKLRDGGVQSVNVVPGAHDRQVIMTSVPQEAIYTGNSALKTEFSFGNEARHNAQMILVSTVDPGDDRTVKITGFNYDKDFYKFDNVPPFGRAFSNGFDNGFN
Physico‐chemical
properties
protein length:852 AA
molecular weight: 93909,82440 Da
isoelectric point:5,26081
aromaticity:0,09624
hydropathy:-0,37418

Domains

Domains [InterPro]
DC_0118
STR
1–686
DC_0118 DC_0808
NF040662
Unmapped
352–832
NF040662
XZE13101.1
1 852
Architecture
STR
RBD
STR 1-686 | RBD 703-846 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XZE13101.1
1 852
Domain Start End Length (AA) Confidence
N-terminal 1 231 231 0,9693
Central domain 232 430 200 0,6542
C-terminal 431 852 421 0,1587
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-231
Central
232-430
C-terminal
431-852

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage GSP006
[NCBI] 		3452862 Viruses >
Host Salmonella enterica subsp. enterica
[NCBI] 		59201 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Salmonella

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XZE13101.1 [NCBI]
Genbank nucleotide accession
PV890987.1 [NCBI]
CDS location
range 4067 -> 6625
strand +
CDS
TTGGCGCTAGTAATTCACTACACACGAAACGAAGACGGCACATTTGACGTTAAACGTTATCGCGATAATCCGATGAACTTCGTCGTGAACCACGTTCCGGACGGGGTTCCGGTACGTGTTTTCATCGACGAAATCGGAGAAGATAACGACGTAACAGAAGACTTCGAAGCACTGAAAGAAAACGCGACTTTCCACATTGTGGAATCAGCTGGTGGTGGCGCCATTAAAGGCGTCATGAAGATTTTTAGCGTTGTCCTTAAACCTCTAGCGAAACTATTATCGCCGTCGGTGAAGGGGGCATCATCTAACCTCGCGAACTCACAGGCGGATTCCCCGAACAACAGTCTCACCGACCGTAACAACAAGGCCCGCCCATACGAGCGCAGCTACGACATCTGCGGGACGGTGCAAACCATCCCCAATAACCTTATGACTACTTATAAAGTGTTTAACGCTGCTGGTAAAATTGTAGAGTATGGTTACTACGACGCGGGTCGGGGATATCTCGATATCCACCCTGAGGATATAACCGATGGTGATACGCGCGTTTCTGATATCACCGGCACGTCAGTCGCCGTGTACGCGCCGTATACGTCGCCTAATAATACATCCACACCGCAGGTCATGGTCGGCGACCCGATAGAACAAGGACTGTACATCACCGTAGAATCTAACGAAGTGGACGGCGTGGTTTTGAAAGCACCCAACGGTCTGGGAATTTCTTTCTCTTACATGTCTGGGTATCCGTCTTTGTCAGGAAACATTGGCACTATATACGACCCAACAGGTGGCTCGGATTTTTCTGGAGTGTTGGTACCTAATGACACGTTTTCGTTGGTGTCAGCGTGGACAAATACAGACGTCGACTTGTCCGGGGGTGGGTACCAAGTGTTAAGCGTATCCGAAGGGACAATTACATTTATTGTACCTGGCGGCCTTATCGGTCGGTGGCACGAAATAAGACCAGGTTCATTTTTTCGAGGTGACGGAGAGGCGTCGCTGCAACCGGATAACACATACGAGAAAACCTTAACCGATTGGGTGTCAATAAACCGTACCGAGGTTGAGCGCATAGTTGCCAATATCGCCGCCGCCAATGGTATGTATAAAGACAACGGCAAATCTAAAACACTAGCGTCGGTTACCGCGGAGATACAGTACCAGCTGCTTGATGAAAATAGCACCCCTTATGGGCCGATATACACTGCACAAGGAACCGTGTCCGGGCGAACCCCAGACTACAACGGTGTCACTATTTACGCCGACCTGCCGGTTGTGTCGCGGGTGCGGGTGCGCGCCAGAAGGGTGACAGACCTCGACTTTAATTTCGAGGGGTCTGTAGTTGATGAGATAACGTACGTTAACTTGTACGGGCAAACACGCGATAACACTCCGCACTACGGCAACAGAACTACCGTACACTCGATGCGTAAACAGACACCGCGTGCTGCGGAAGTTAAGCAACCACAGTTACGTATGATTGCCACCGAAATGGTACACAAATATCTTGGTAACGGTGTTTTCGAAGATACGATGACCCCCAATACCCAGGCCGTGCAATCTCTTATCCGCCTGGCGCGTGATCCGGATGTGGGGGGTTTAAACCTGACGGTACGCAACATGGATAAGTTACTTGCCGTGCAGAACGAGGTCGAAGCGTATTTCGGTGACAAACAGGCGGGGGAATTTTGCTACACGTTTGATGACTATAAAACCACCATGCAGGACATAGTTAGTACTATAGCAGACGCCATATTCTGCACCCCATATCGGCGTGGGGCGGATATCCTTCTCGATTTTGAGCGCCCCCGCATGGGTCCTGAGATGGTGTTCACCCACCGAAGCAAGGCCGGTACTTCTGAAAAGTGGACCAGAACATTTAACGATTCTCAGGTGTTCGATAGTCTTAAATTCTCGTACATAGACCCAAAAACAAACGTTAAAGAAACAATAACAATACCTGAAACTGGCGGGGTTAAAACGGAGACCTACGATTCAAAAGGTATTCGCAACTATAAGCAGGCTTTCTGGGCAGCAAACCGTCGTCATCAGAAAAACATTTTAAAGAAAATTTCAGTGTCGTTTACCGCCACGGAAGAGGGTATCTTTGCTTTACCAAATCGTGCCATTAGTGTGGTTAAGGGTTCACGTATGGCGACCTACGACGGCTACGTAACCGCGGTAAACGGGCTCACCGTAGAACTGTCACAACCAGTTAAGTTCACCTCGGGAGATGACCATTCTTTGATTCTCAAGTTACGTGACGGCGGCGTGCAAAGTGTTAATGTAGTCCCTGGAGCGCACGACCGGCAGGTAATCATGACGTCAGTACCGCAAGAAGCCATTTACACAGGTAATAGTGCTTTGAAAACTGAATTTTCATTCGGCAACGAAGCAAGGCATAATGCTCAGATGATTCTTGTTTCTACGGTAGACCCTGGCGATGACAGAACAGTCAAAATAACCGGGTTTAACTATGACAAGGATTTCTATAAGTTTGACAACGTGCCTCCTTTCGGTCGTGCGTTCTCCAACGGATTCGATAACGGTTTTAACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
2c470ad4bc6402873028f8ba2c47bb05ea65daa22e89726a8e70d288727eccd6
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8514
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50