Protein

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Genbank accession
WVP99829.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,96
Protein sequence
MSSGCGEVMSLNDLQVAKKHQIFEAEVITGKQGGVAGGANIDYATNQVTGQTQKTLPAVLRDVGFSPASFNFTTGGTLGADDADKAVLWPKEDGGDGNYYAWRGPLPKVIPAASTPLTTGGISDSAWVAFGDITFRAEADKKFKYSVKLSDFTTLQQLADAAVDSVLIDRDYNFSNNETVNFGGKTLTIDCKAKFIGDGMLIWEQLGEGSVVNQPHMRTQTTPYTVYRFDDNGNWVTNPSMVLASVIQRMDKGYKPNINDLDIWDSLPDHIKNQTAGATLRVMSGSNITLNSPEATFGGYLFTLCNRILVKNPRNFIAWESGITFENHHTSAWGYGNWVIGGEIKYGSGSAVLFIRNDGGDDHDGGVRDLISYRVGESGVKTYQNEIGGRSARNYRLVFDNITTIQCYYDGIDINADTGPQVERVDDYPLSQYPWFKLPTKHIIRNIITRDCMGIGAWWDGQNNIIDNIVTYEAHKEGIFDRGTNNDITNVTVIGANKDLTNLNQLTCEGGSRLRGVLIHAYTTQGYAVYAPQSEISAVACAGNGTKKILCTYVGDVQGGNINVQHSENQMTLAMRPAMGGTINPSLVMTADCQVALPGGEASIVKLSAIQGGVRVGELQLNRLGFKHMSIPVASSQLPDSALEHNSSIGFFFGSDGVLRILAKKPDGTYVTYTLS
Physico‐chemical
properties
protein length:676 AA
molecular weight: 73378,48620 Da
isoelectric point:5,38688
aromaticity:0,09024
hydropathy:-0,24630

Domains

Domains [InterPro]
G3DSA:2.10.10.80
ATT
65–136
G3DSA:2.10.10.80 IPR012332
G3DSA:2.10.10.80
ATT
65–130
G3DSA:2.10.10.80 IPR012332
IPR040775
RBD
86–132
IPR040775 IPR011050
IPR015331
RBD
138–675
IPR015331
WVP99829.1
1 676
Architecture
ATT
STR
ATT 65-136 | STR 137-675 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WVP99829.1
1 676
Domain Start End Length (AA) Confidence
N-terminal 1 178 178 0,8986
Central domain 179 563 386 0,9885
C-terminal 564 676 112 0,8529
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-178
Central
179-563
C-terminal
564-676

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage vB_SalS_JNS02
[NCBI] 		3117419 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica subsp. enterica serovar Typhimurium str. ATCC 14028
[NCBI] 		1299114 Pseudomonadota > Gammaproteobacteria > Enterobacterales > Enterobacteriaceae > Salmonella > Salmonella enterica

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WVP99829.1 [NCBI]
Genbank nucleotide accession
PP189839.1 [NCBI]
CDS location
range 40178 -> 42208
strand +
CDS
ATGTCTAGTGGTTGCGGTGAGGTAATGTCACTTAATGATTTACAGGTAGCTAAAAAACACCAGATTTTCGAAGCCGAGGTGATCACCGGCAAACAGGGCGGTGTAGCGGGTGGCGCCAATATCGACTACGCTACTAACCAGGTAACCGGGCAGACGCAGAAGACCCTGCCTGCGGTTTTACGTGATGTTGGTTTCTCCCCGGCGTCTTTCAACTTCACAACCGGCGGGACCCTGGGAGCTGACGACGCGGATAAAGCGGTTCTTTGGCCGAAAGAAGATGGCGGGGACGGTAACTATTACGCATGGCGTGGCCCCCTGCCGAAAGTTATCCCTGCGGCGTCGACACCTCTTACGACAGGCGGCATTTCTGATTCGGCTTGGGTAGCTTTTGGGGACATCACCTTTCGTGCAGAAGCGGATAAGAAATTTAAATACTCCGTTAAGCTGTCCGACTTTACTACGTTACAGCAACTAGCCGATGCCGCCGTTGATAGTGTTCTTATCGACCGCGATTACAACTTCAGCAACAATGAGACCGTTAACTTCGGCGGGAAGACCCTGACCATCGACTGTAAAGCGAAGTTTATCGGCGACGGCATGCTAATATGGGAACAACTCGGCGAAGGGTCTGTTGTGAATCAACCACATATGCGGACACAAACCACACCGTACACGGTGTATAGATTCGACGACAACGGTAACTGGGTGACTAACCCGTCAATGGTGCTGGCATCGGTAATCCAAAGGATGGATAAGGGGTATAAACCCAATATTAACGATTTGGATATCTGGGATAGCCTTCCGGATCACATAAAAAATCAAACAGCCGGTGCGACCCTCCGCGTTATGAGCGGGTCAAACATAACCTTAAATTCTCCGGAAGCTACTTTCGGCGGTTATTTATTCACCCTATGCAATCGTATATTGGTTAAAAACCCACGAAATTTTATTGCATGGGAGTCGGGTATCACTTTCGAAAACCATCATACATCCGCATGGGGTTATGGTAACTGGGTTATCGGCGGAGAGATAAAGTACGGTTCAGGGTCTGCCGTTTTGTTCATTCGCAACGACGGCGGTGATGACCACGATGGAGGGGTAAGAGACCTCATATCTTATCGTGTCGGGGAGAGCGGTGTGAAAACTTACCAGAACGAAATAGGGGGTCGGTCCGCCCGAAACTACCGTCTGGTGTTCGATAACATTACGACCATACAGTGCTATTACGACGGGATAGATATCAACGCGGATACAGGCCCCCAGGTTGAGCGCGTAGATGATTACCCGCTCTCCCAATACCCCTGGTTTAAGTTGCCGACTAAACACATCATCCGCAACATAATAACGAGGGACTGCATGGGTATTGGGGCCTGGTGGGACGGCCAGAATAATATCATCGATAATATTGTGACGTACGAGGCCCATAAAGAGGGTATTTTTGATAGAGGTACTAACAACGACATCACTAACGTAACGGTTATAGGTGCAAACAAGGATTTAACTAACCTGAATCAGCTTACATGTGAGGGCGGCAGCCGGCTGCGGGGTGTGTTGATTCATGCGTATACCACACAAGGATATGCCGTATATGCACCACAATCGGAAATATCCGCTGTCGCTTGCGCGGGGAACGGGACCAAGAAAATACTTTGTACCTATGTTGGCGATGTACAAGGCGGCAACATCAACGTCCAGCATAGCGAAAACCAGATGACCCTTGCTATGCGCCCGGCTATGGGTGGTACTATAAATCCATCGCTAGTAATGACCGCAGATTGCCAAGTTGCCTTGCCTGGTGGTGAAGCTAGTATTGTTAAGCTTTCAGCAATACAGGGAGGTGTACGAGTAGGTGAGCTCCAACTTAACCGCTTAGGCTTTAAGCATATGAGCATACCTGTTGCATCTTCGCAATTACCAGATAGTGCTTTAGAACATAACTCATCTATAGGTTTCTTCTTCGGCAGTGATGGGGTGTTGCGAATCCTTGCCAAGAAGCCAGACGGGACTTACGTAACCTACACCTTATCCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
774769f07d78da880a37a23cb638f5cc140c7f4c327f2a4c91deae09dd2c2dbb
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7145
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50