Protein

View in Explore
Genbank accession
AUR92605.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MAYSPSEKYPGAVDVDPDYQGGKFRDNNPSTTNNGSPLKAIDRNELLARDEAIMNDAGFEYSGVADTPQDSQLFKAYKASLGNGVNLLSNHNFLIQTLDDSQPLPGSTPTTYPAGYQIFSGVFANETTGIANLTYIDGRVSFSGGDLYFYAPNVGGIGQLASDQLVASVADLDGKPRTRGVSFSLVGNDYRVTVGVDALEDESSSITPLGSVKLEQGAVATRHETESLSSNNLSEHTDIFIKPSVGNSAVDNMIAELTLNPLAYALGTIFKTGGITWEYKDSTGPITLNNFRAFNVICVFDLGAYGEGGDDWKGIQDAMNYIEGTPNRSGVIYFPPPPSGKYRVTQTLTGNTDPTSPSYNMTFLGASASNGGAAGGSIIEMDATDGTPLLKVDSGFMAENMKFSYPYAKSNGTVADPIFTVVCDNYTTVADVDAAFVNCHFLNFHRAIKMVGRGLYLDEVDFTGGGSSTEECACIDLYLQDPFQPGDEVDQVITEAQRTYSFKGGRVHATNGAYFRNKGSNANNVKGVQIANLYLDTNVKILDGSLRDSSVIGVTAINSRAKLFDIPDGGAFKDVTVSGGIFAGIRQETLGQLYGDGSAVTQAEVDYRCFTTILEIGAGCDVSGIVFDDNIIKGVTRDVVNTQSPMYEFTFTDNNMSEVCKDNKTSGGTIRAIFQFNDQVIDGLTVTGNGCHSDSSNQVNTPLFSGDANVVNYSVNPNHMRGRVSALSFRHSEHDFGGERADVYCGSYTGTGSPGAKKIFSKRLAKAMCVTQRTGTNAGQSITVIDGTEAILGVRLVNGNQVFVDLTFNEGGSEYDYVVWF
Physico‐chemical
properties
protein length:821 AA
molecular weight: 87853,23730 Da
isoelectric point:4,59528
aromaticity:0,09622
hydropathy:-0,23557

Domains

Domains [InterPro]
DC_0205
STR
1–471
DC_0205
IPR012334
STR
295–456
IPR012334
AUR92605.1
1 821
Architecture
STR
STR 1-471 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUR92605.1
1 821
Domain Start End Length (AA) Confidence
N-terminal 1 310 310 0,7913
Central domain 311 728 419 0,9905
C-terminal 729 821 92 0,9566
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-310
Central
311-728
C-terminal
729-821

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.174.O._10N.261.55.A8
[NCBI] 		1881343 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio lentus
[NCBI] 		136468 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR92605.1 [NCBI]
Genbank nucleotide accession
MG592541.1 [NCBI]
CDS location
range 28690 -> 31155
strand +
CDS
ATGGCTTACTCACCTAGCGAAAAGTATCCGGGCGCAGTCGATGTCGATCCGGATTATCAAGGCGGTAAATTCCGCGACAATAACCCATCCACAACGAATAACGGCTCCCCGTTAAAAGCCATTGACCGTAACGAGTTACTTGCTCGTGACGAAGCGATCATGAATGACGCTGGTTTCGAGTACAGCGGAGTTGCTGACACGCCTCAAGACTCCCAACTATTCAAGGCTTACAAAGCATCGCTTGGTAATGGCGTAAACCTACTGTCAAACCATAACTTCCTTATTCAAACCTTGGACGACTCGCAACCCCTCCCTGGCTCAACACCTACAACATACCCAGCTGGTTATCAAATATTTTCTGGTGTTTTTGCCAATGAAACTACGGGAATCGCAAACCTAACCTACATTGATGGACGCGTGTCATTCAGTGGTGGTGATTTGTACTTTTACGCGCCAAATGTAGGAGGAATTGGGCAGTTGGCTTCAGATCAACTTGTAGCTTCAGTTGCAGACTTAGATGGTAAACCTCGTACGCGCGGCGTTTCATTTTCTCTAGTTGGAAATGATTATCGCGTGACAGTTGGCGTTGATGCGCTTGAGGATGAAAGCTCTTCAATAACGCCTCTTGGATCTGTAAAGCTTGAGCAGGGTGCAGTTGCGACTAGACATGAAACTGAATCTTTGAGTTCTAATAATTTGTCAGAGCACACAGATATATTCATCAAGCCGTCTGTGGGCAATTCTGCTGTAGACAACATGATTGCAGAATTAACTTTAAACCCTCTAGCCTATGCGTTGGGGACTATATTCAAAACCGGTGGTATTACATGGGAATACAAAGACTCAACAGGCCCGATAACGCTTAACAACTTCCGTGCCTTTAACGTCATTTGTGTTTTTGACCTAGGGGCGTACGGAGAAGGAGGGGACGACTGGAAAGGTATTCAGGATGCCATGAATTACATCGAAGGCACGCCTAACAGGTCAGGAGTTATTTACTTCCCGCCGCCTCCTAGTGGAAAGTATCGCGTAACACAAACCCTGACAGGTAACACAGACCCTACAAGTCCTTCATACAACATGACGTTCCTGGGCGCTTCTGCCTCTAATGGTGGGGCTGCTGGCGGTTCTATTATCGAGATGGATGCGACGGACGGAACGCCGCTACTTAAAGTGGACAGCGGATTCATGGCTGAGAATATGAAGTTCTCGTACCCGTACGCAAAATCTAACGGAACGGTCGCAGACCCAATCTTTACCGTTGTTTGTGATAACTACACGACAGTAGCTGATGTGGATGCCGCATTCGTGAATTGCCACTTCCTAAACTTCCATCGCGCAATAAAAATGGTAGGTCGCGGACTTTATCTTGATGAGGTTGATTTTACAGGTGGCGGTAGTTCAACTGAAGAGTGTGCGTGTATAGACTTGTACTTACAAGACCCGTTCCAACCGGGTGATGAAGTTGACCAGGTTATAACCGAGGCTCAACGTACTTATTCATTTAAGGGTGGCCGCGTTCACGCAACTAATGGGGCGTATTTCAGAAATAAAGGGTCGAACGCAAATAATGTAAAAGGTGTGCAAATTGCTAACCTATATCTAGATACGAACGTAAAAATACTAGATGGCTCTTTGCGCGATTCGTCAGTGATAGGTGTCACCGCTATAAACTCACGCGCCAAACTTTTTGACATCCCGGATGGCGGAGCGTTCAAGGACGTAACCGTGAGTGGAGGAATCTTTGCAGGTATAAGACAAGAAACACTGGGTCAACTGTACGGAGACGGAAGCGCTGTAACTCAGGCGGAGGTGGATTATCGTTGTTTCACTACTATTCTGGAAATTGGCGCAGGGTGTGACGTTTCTGGGATTGTTTTTGATGACAACATCATTAAAGGTGTAACTCGTGACGTTGTTAACACTCAATCTCCTATGTATGAGTTCACCTTTACCGACAACAATATGTCAGAGGTCTGTAAGGATAATAAGACATCTGGAGGAACAATACGCGCGATATTTCAGTTTAATGATCAGGTTATTGACGGGCTTACCGTCACTGGAAATGGCTGTCATTCGGATTCGAGTAACCAAGTAAACACGCCGTTGTTTAGTGGTGATGCTAATGTCGTAAACTACTCAGTGAATCCAAACCACATGAGAGGGAGAGTTAGTGCACTTTCATTTAGACATTCGGAGCATGATTTCGGGGGCGAGAGGGCAGACGTATACTGTGGTAGCTATACGGGAACCGGAAGTCCTGGTGCGAAAAAAATATTTAGTAAAAGGTTAGCGAAAGCCATGTGCGTAACTCAGAGAACGGGCACAAATGCAGGCCAGAGTATAACCGTTATAGACGGGACCGAGGCAATACTAGGCGTTAGACTTGTAAACGGTAACCAAGTATTTGTCGACCTGACATTCAACGAAGGCGGTAGTGAGTACGATTATGTAGTTTGGTTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
23014ebf2089d11c4f0e443a3072370e0cf24cae6334fc94023b16eb31e075ad
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6806
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank