Protein

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Genbank accession
AXC39371.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 0,75
Protein sequence
MTVGRYSYNHIHDIYGDAIELNVVNSHYPDGFVIEGNLIENVDGTNAPIPLSNWGIGIGVAGSGPYDVNADDSQYVKNSL
Physico‐chemical
properties
protein length:80 AA
molecular weight: 8624,31270 Da
isoelectric point:4,19230
aromaticity:0,10000
hydropathy:-0,20750

Domains

Domains [InterPro]
DC_1808
STR
2–79
DC_1808
IPR023882
RBD
7–78
IPR023882
AXC39371.1
1 80
Architecture
STR
STR 2-79 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AXC39371.1
1 80
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0112
Central domain 11 69 60 0,9996
C-terminal 70 80 10 0,0699
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-69
C-terminal
70-80

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage CMSTMSU
[NCBI] 		2267248 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AXC39371.1 [NCBI]
Genbank nucleotide accession
MH494197 [NCBI]
CDS location
range 329944 -> 330186
strand +
CDS
ATGACAGTTGGGCGTTATTCATACAACCACATCCATGATATATATGGTGATGCAATTGAATTGAACGTAGTCAACTCACATTACCCAGACGGATTTGTAATAGAAGGCAACTTGATTGAAAACGTAGATGGTACAAATGCACCAATTCCTCTTTCAAACTGGGGTATTGGTATCGGTGTTGCAGGTTCTGGTCCTTATGATGTGAATGCTGATGATTCACAATATGTAAAAAATTCGTTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b156d7877e9c4109fcaf7e26996f204ab84c9d69fe2100c97eefba0deab83715
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5042
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome Sequence of Escherichia phage CMSTMSU Lelin,C., Thirumalaikumar,E., Abinaya,A., Paul,S., Rashmi,R., Arun,A., Sudhakar,S. and Citarasu,T. 2018-10-11 — GenBank