Protein

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Genbank accession
QWY83111.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MKIFAKGTMLGNPLLSSEAVIPVFIAPTMPPSYTQRSGADEKWGFLDFMVTEAGAAVNSTIGRILVTNAPSPNALYIMTGETDGLAIVPDTGMIYVTNGSLLTVGIRTITVTAINLAGFASTTIRIAVVGTATNVIYIDPTNGDDSKTGTKPSQAIKTWAARTSKGSGTKIYAVRRGTALDAAMVLANNETVRCYGDPALPAPKISTTSAFGLTGTDLAGATIQDIEISADQRAVHINRGTNFKAFRCVFRVPTDGTNRAPFYSTQLTGLVFRHNWVPANSYGDNVYCRGLKNAELAYNLLETPLGSTSDNLQITSERNVLYPCADVWIHHNTLVNVGGTSAKGNCVIEGCVRALVENNDFSGLYFCMSSVSTFNTIRNNRMAKATYSSNSFTMGIGSAYDTGEQSWYDNRLSSPGNRAFSISGTGEASGAPLWSRYDLEINDNIGEGHTAFFHQNRLMSGYFQYNVGQNNVSNTVSGVTTVATGGDYTTRTVTPNFLNAGEGPVCLERARITGLVQDGQTVTVSEPVFAGAVSLQYQWRLNGKYIEGATGQSFTIPSGHGSQISDRVPTFAATGFPGGAAGELSCITRGVDAAGNVMIAPALFANGEAYMPITA
Physico‐chemical
properties
protein length:615 AA
molecular weight: 65256,53660 Da
isoelectric point:6,20377
aromaticity:0,08780
hydropathy:-0,06195

Domains

Domains [InterPro]
DC_1680
ATT
22–124
DC_1680 DC_2066
IPR011050
STR
73–503
IPR011050
DC_0805
RBD
110–229
DC_0805
QWY83111.1
1 615
Architecture
ATT
STR
RBD
ATT 22-124 | STR 125-503 | RBD 505-601 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QWY83111.1
1 615
Domain Start End Length (AA) Confidence
N-terminal 1 33 33 0,9665
Central domain 34 516 484 0,8971
C-terminal 517 615 98 0,2707
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-33
Central
34-516
C-terminal
517-615

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage RHph_X66
[NCBI] 		2836081 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QWY83111.1 [NCBI]
Genbank nucleotide accession
MW960030.1 [NCBI]
CDS location
range 114418 -> 116265
strand +
CDS
ATGAAGATCTTCGCCAAGGGCACCATGCTAGGCAACCCGCTCCTGTCGAGCGAGGCCGTCATTCCTGTCTTCATCGCCCCGACGATGCCTCCCTCTTACACCCAGCGGTCGGGCGCGGACGAGAAGTGGGGCTTCCTCGACTTCATGGTGACCGAGGCCGGCGCCGCGGTGAATTCGACCATCGGCCGCATCCTCGTGACCAACGCGCCATCGCCCAACGCACTCTACATCATGACCGGCGAGACGGACGGCCTGGCAATCGTGCCTGACACCGGCATGATCTACGTGACGAACGGCTCGCTACTGACGGTCGGCATTCGCACGATCACGGTCACCGCAATCAACCTCGCCGGCTTCGCCAGCACGACGATCCGCATTGCGGTTGTGGGCACGGCGACCAACGTCATCTACATCGACCCGACGAATGGCGACGACAGCAAGACCGGCACCAAGCCCTCGCAGGCTATCAAGACCTGGGCGGCCCGCACGTCCAAGGGCTCAGGCACGAAGATCTACGCCGTGCGCCGCGGCACCGCGCTTGATGCGGCAATGGTGCTCGCCAACAACGAGACCGTCCGCTGCTATGGCGACCCTGCACTGCCGGCGCCGAAGATCAGCACCACGTCGGCCTTCGGGCTGACCGGCACCGATCTCGCCGGCGCAACTATCCAGGACATCGAAATTTCGGCCGACCAGCGCGCCGTTCACATCAACCGCGGCACGAACTTCAAGGCGTTCCGCTGCGTGTTCCGCGTGCCGACCGACGGCACCAACCGCGCTCCCTTCTATTCGACCCAGCTCACGGGCCTGGTCTTCCGGCACAATTGGGTGCCGGCGAACTCTTATGGCGATAACGTCTATTGCCGCGGGCTCAAGAACGCCGAGCTCGCCTACAATCTGCTGGAAACGCCGCTCGGCAGCACGTCGGATAATTTGCAAATCACCTCTGAGCGCAACGTCCTCTACCCGTGCGCCGATGTCTGGATTCATCACAACACCCTGGTCAACGTGGGCGGCACCTCGGCGAAGGGCAACTGCGTCATCGAGGGCTGTGTGCGAGCGCTGGTCGAGAACAACGACTTCAGCGGGCTCTATTTCTGCATGTCGTCGGTCTCGACCTTCAACACCATCCGCAACAACCGGATGGCTAAGGCGACCTACAGCTCCAACTCCTTCACCATGGGCATCGGCTCGGCCTACGATACCGGCGAGCAGTCCTGGTATGACAATCGCCTGTCCAGCCCGGGCAATCGCGCCTTCTCGATCTCGGGCACCGGTGAAGCTTCAGGAGCTCCGCTCTGGTCCCGCTACGACCTGGAGATCAACGACAACATCGGTGAAGGTCACACGGCCTTCTTCCATCAGAACCGTCTGATGTCCGGCTATTTCCAGTATAACGTCGGGCAGAACAACGTCTCCAATACGGTCTCGGGTGTGACGACGGTTGCGACGGGCGGCGACTACACGACCCGCACGGTCACGCCGAACTTCCTCAATGCCGGTGAGGGTCCGGTCTGCCTCGAGAGGGCTCGGATTACCGGCCTGGTTCAGGATGGGCAGACGGTAACGGTCAGCGAGCCTGTATTCGCCGGCGCCGTGTCGCTGCAGTATCAGTGGCGCTTGAACGGCAAGTATATAGAAGGCGCCACGGGCCAGAGCTTCACCATCCCGTCAGGTCACGGCAGTCAGATCTCCGATCGTGTTCCGACCTTTGCCGCGACGGGCTTTCCTGGCGGGGCGGCCGGCGAGCTGTCGTGCATCACCCGCGGCGTTGACGCCGCAGGCAACGTGATGATCGCCCCTGCCCTGTTTGCCAACGGCGAAGCCTATATGCCGATCACTGCATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
f10193ff044a32f2969a14fe5f73925ed056311f086548743d2229b48472067d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7127
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Hidden Diversity and Expansion of Phages in the Symbiotic Bacteria Rhizobium Gonzalez,V., Santamaria,R.I., Bustos,P., Cauwenberghe,J.V. and Juarez,S. 2017-09-25 — GenBank