Protein

View in Explore
Genbank accession
YP_010647936.1 [GenBank]
Protein name
tail fiber protein and host specificity
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,83
Protein sequence
MQIWIHDKSMRKVCALNNEIPGMLPYSNSQWHTYLEYSTSTFDFVIPKIVNGKLHDDIKYINDQMYVSFYYDNSYHVFYVSQLVENDFNFQVTCNNTNLELAQEQSLGFKSDTPQNIAWYLGKLGILGFAGLEIGINEVSDKTLTLEFDKKDTQLSQLHSLMSKFDAEFVFKTELNRDGTLKRFVIDIYQEADKNHHGIGKARGDVILYYQSGLKGVQVTSDKTKLFNAGNFIGQDGVNLNDVEFEEKNELGQVEFYSKRGTSLVFAPLSRERYPSTMNPDSADNWTRKDFQTEYSDVDSLKAYALRTIKQYAYPLLTYTVDVQSSFLDNYKDINLGDTVKIIDNNFRGGLALEARVSEMIISFDNPTNNSVVFTNFRKLDNKPSSELQQRIDEIVSKSLPYHVEIRTTNGTAFKNGIGSSTVKPVLKQGDKIVNATYRFVIDGSIVSSGLTYTVKASDITKPTVITISAWVDNKEVASEEITFLNVSDGKQGPKGDRGNDGKTTYFHTAWSYSADGTDRFSTVYPNLNLLVNSSAKTKDGFFKNFDKVENGYGEVTMTGTNTWVSRDLWDGFSMKPRDYKPGDKYTMSMDVMFTSWNLPAGTHLDEFWIGQRYGNNSWKRICFIDLPKDPSKMLNQWVRITQTSTIPPYEDPAINTEACFLTKFTGPSEGSFTIRVRNPKQEPGETATPYMPSASEATTADYPSFIGHYTDYTQVDSPNPRDYTWSLIRGNDGKDGANGGENLIVNSAFPEDIDGWGFWDESTPNNNLHIATHGFYYNGTKPLFRLDNNTNGVVPASTKRFPVKRNTDYSLNIQIFATGNLKSVDIYFLGRKANETDKELTKVIHLKTHTGSPSTTQTVKWHLTFNSGDCDEGFIRINNNGTTDGKTSTLFFAELDCYEGTGDRAWQASSKDLEEEIDTKADDVLTQAQLNRLNETNSIIKAELDAKASLDTLNQWVEAYQNFVNANNANRAQAEKDLADASARVTKLENDLNDMSERWNFIDSYMAASNEGLVVGKKDKSSSIMFNPNGRISMFSAGNEVMYISKGVINIENGIFSKTIQIGRYREEQDLLNPDRNVIRYVGGA
Physico‐chemical
properties
protein length:1086 AA
molecular weight: 122458,85210 Da
isoelectric point:5,19658
aromaticity:0,11234
hydropathy:-0,55562

Domains

Domains [InterPro]
DC_0120
STR
1–1086
DC_0120
IPR054563
ENZ
538–679
IPR054563 G3DSA:2.60.120.260 Coil
YP_010647936.1
1 1086
Architecture
STR
STR 1-1086
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage SW3
[NCBI] 		2419649 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptococcus thermophilus
[NCBI] 		1308 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010647936.1 [NCBI]
Genbank nucleotide accession
NC_070718.1 [NCBI]
CDS location
range 15419 -> 18679
strand +
CDS
ATGCAAATTTGGATTCATGATAAAAGCATGCGCAAGGTGTGTGCATTGAATAATGAAATCCCCGGAATGTTACCTTATTCGAATAGTCAATGGCACACCTACCTTGAATACTCAACCAGTACATTCGATTTTGTGATTCCTAAAATCGTAAATGGTAAGCTACATGATGATATAAAATACATCAATGATCAGATGTACGTGTCATTTTACTACGATAATTCATACCACGTTTTTTATGTCTCTCAACTCGTTGAAAATGACTTTAATTTTCAAGTGACTTGTAATAATACTAACTTGGAACTAGCACAAGAGCAGTCGCTGGGTTTCAAAAGTGATACACCTCAAAATATCGCATGGTATTTAGGAAAGCTTGGAATTTTGGGGTTTGCAGGTCTTGAAATCGGCATCAATGAAGTATCTGACAAAACATTGACGCTAGAATTTGATAAAAAAGATACGCAACTGTCTCAACTGCATAGTCTTATGTCAAAATTTGATGCAGAGTTTGTTTTTAAAACGGAATTAAACAGAGACGGAACTTTGAAACGCTTTGTCATTGACATCTACCAAGAAGCAGATAAAAACCATCACGGTATAGGTAAAGCTAGAGGAGATGTCATTCTCTACTATCAAAGCGGTCTGAAAGGCGTTCAAGTAACTAGCGATAAAACCAAGCTTTTCAATGCTGGTAATTTCATTGGACAAGATGGCGTTAACCTAAACGATGTCGAATTTGAGGAAAAGAACGAGCTAGGACAAGTAGAATTTTATTCTAAGCGTGGTACTAGTTTAGTATTCGCTCCGCTGTCTAGGGAACGCTACCCATCTACCATGAATCCAGACAGCGCTGATAACTGGACACGTAAGGATTTTCAAACAGAATACAGTGATGTTGATTCCCTCAAAGCTTATGCCTTGCGTACTATCAAGCAGTATGCTTATCCACTATTGACTTACACAGTAGATGTTCAGTCTAGCTTTCTGGATAACTATAAAGACATCAATCTAGGTGACACTGTTAAAATCATCGATAATAATTTTAGAGGTGGTTTAGCCCTCGAAGCGCGTGTATCTGAAATGATTATCAGCTTTGACAATCCCACAAACAATTCGGTTGTTTTTACAAATTTCAGAAAGTTGGATAATAAACCGTCTAGCGAATTACAACAACGTATCGATGAGATTGTTTCTAAGTCATTGCCATATCATGTTGAGATAAGGACCACGAATGGTACAGCATTTAAGAATGGTATTGGTAGTTCTACTGTTAAACCAGTTTTGAAACAAGGCGATAAAATTGTTAATGCAACTTATCGATTTGTAATTGATGGCTCTATTGTTAGCTCTGGTCTGACCTATACCGTCAAAGCAAGCGATATCACAAAACCAACTGTGATAACAATTTCCGCTTGGGTAGATAATAAAGAAGTTGCTTCAGAAGAGATTACTTTTTTAAATGTATCAGATGGGAAACAAGGACCTAAAGGTGACCGTGGTAATGATGGGAAGACTACATATTTTCACACAGCATGGTCTTACAGCGCAGACGGCACTGATAGGTTTAGTACTGTTTATCCAAATTTGAATCTGTTAGTTAATAGTTCAGCTAAAACCAAAGATGGGTTTTTTAAAAACTTCGACAAAGTAGAAAATGGCTACGGAGAAGTTACAATGACGGGAACTAATACATGGGTTTCTAGAGACCTGTGGGATGGTTTCTCTATGAAACCTAGAGATTATAAACCCGGCGATAAGTACACAATGAGTATGGACGTTATGTTCACAAGTTGGAATCTCCCTGCTGGAACACATCTTGACGAGTTTTGGATAGGTCAGCGATATGGTAATAACTCATGGAAGCGTATTTGTTTTATTGACTTACCTAAAGACCCTAGTAAAATGCTGAACCAATGGGTAAGAATAACACAAACGTCAACGATACCTCCGTATGAAGACCCCGCTATCAACACGGAAGCATGCTTTTTGACTAAATTTACTGGTCCGAGTGAAGGTAGTTTCACGATAAGGGTTAGAAATCCAAAACAAGAACCAGGCGAAACCGCCACTCCATACATGCCATCAGCTAGCGAAGCCACAACTGCTGACTATCCAAGTTTCATCGGACACTACACAGACTATACACAAGTAGATAGTCCTAATCCTCGAGATTACACTTGGAGTCTGATACGAGGAAACGACGGGAAGGATGGAGCAAATGGTGGAGAGAATCTAATTGTTAATTCAGCATTCCCAGAAGATATTGACGGATGGGGTTTTTGGGACGAAAGTACACCTAATAACAATCTTCATATAGCTACACATGGATTTTACTATAACGGAACAAAACCCCTTTTTAGATTAGACAATAACACCAATGGTGTGGTTCCTGCATCAACAAAACGTTTTCCAGTCAAACGCAACACTGATTATTCTCTAAATATTCAGATATTTGCAACCGGAAACCTCAAGAGCGTTGATATCTATTTTCTTGGCAGGAAGGCGAATGAAACTGACAAGGAATTGACTAAAGTGATCCATTTAAAAACACATACAGGTTCACCATCAACCACACAGACGGTTAAATGGCATCTAACATTTAACTCTGGAGATTGCGACGAAGGGTTCATTCGTATTAATAACAATGGCACTACTGACGGTAAAACTTCTACGCTATTTTTTGCAGAACTAGACTGCTATGAGGGAACCGGTGACCGAGCGTGGCAAGCGTCGTCGAAAGATTTGGAAGAGGAAATAGACACCAAAGCCGATGATGTCCTAACACAAGCACAACTCAACAGACTGAACGAAACGAACTCTATTATTAAAGCTGAATTAGACGCTAAAGCGTCGCTTGATACACTCAATCAGTGGGTGGAAGCCTATCAAAATTTTGTTAACGCAAACAATGCCAATCGTGCACAAGCTGAAAAAGATTTAGCTGATGCAAGTGCTCGTGTAACTAAACTAGAAAACGACTTAAATGATATGTCAGAACGTTGGAATTTTATCGATAGCTACATGGCAGCATCAAATGAAGGTCTTGTTGTTGGTAAAAAAGATAAATCAAGCTCTATCATGTTCAATCCAAACGGGCGTATCTCAATGTTCTCAGCTGGGAACGAGGTAATGTACATTTCAAAAGGTGTCATCAATATCGAAAACGGTATTTTCTCTAAAACTATCCAAATCGGACGATATCGAGAGGAACAAGATTTATTGAATCCAGACCGTAATGTCATTAGATACGTAGGAGGTGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
2c613b1054020de5fc2d40383830c9f8c996daa7bfcb47059aeeae209e98c21e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7440
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Biodiversity of Streptococcus thermophilus Phages in Global Dairy Fermentations Lavelle,K., Martinez,I., Neve,H., Lugli,G., Franz,C., Ventura,M., Bello,F., Sinderen,D. and Mahony,J. 2018 — GenBank