Protein

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Genbank accession
ARQ96066.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,83
Protein sequence
MVNSMFWRDLDPYEKSLNYEYPYHPSGNPKHIDVSEIDNLTLADYGWSPDAVKAYMFGIVVQNPDTGQPMGDEFYNHILERAVGKAERALDISILPDTQHEMRDYHETEFNSYMFVHAYRKPILQVENLQLQFNGRPIYKYPANWWKVEHLAGHVQLFPTALMQTGQSMSYDAVFNGYPQLAGVYPPSGATFAPQMIRLEYVSGMLPRKKAGRNKPWEMPPELEQLVIKYALKEIYQVWGNLIIGAGIANKTLEVDGITETIGTTQSAMYGGASAQILQINEDIKELLDGLRAYFGYNMIGL
Physico‐chemical
properties
protein length:302 AA
molecular weight: 34388,72760 Da
isoelectric point:5,18834
aromaticity:0,12252
hydropathy:-0,34603

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage qdsa002
[NCBI] 		1970746 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Staphylococcus aureus
[NCBI] 		1280 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ARQ96066.1 [NCBI]
Genbank nucleotide accession
KY779849.1 [NCBI]
CDS location
range 56517 -> 57425
strand +
CDS
ATGGTTAACTCAATGTTTTGGAGGGACTTAGACCCTTATGAAAAATCATTAAACTATGAATATCCTTATCATCCTAGTGGTAATCCTAAACATATAGACGTAAGTGAGATAGATAACTTAACATTAGCTGATTATGGATGGTCACCTGATGCAGTTAAAGCTTATATGTTTGGTATTGTAGTACAAAACCCTGATACAGGACAGCCCATGGGTGATGAGTTTTATAACCATATATTAGAAAGAGCAGTAGGTAAAGCTGAGAGAGCGCTAGATATTTCTATACTACCTGATACTCAACATGAGATGAGAGATTATCATGAGACAGAGTTTAATAGTTATATGTTTGTACATGCTTACAGAAAACCTATATTACAGGTAGAGAACTTACAGCTACAATTTAATGGTAGACCTATATATAAATACCCTGCTAACTGGTGGAAAGTAGAGCATTTAGCAGGTCATGTTCAATTGTTCCCTACAGCACTTATGCAAACAGGACAATCAATGTCATATGATGCTGTATTCAATGGATACCCTCAATTAGCAGGTGTATACCCACCATCAGGAGCAACCTTTGCACCTCAAATGATACGACTAGAATACGTATCAGGTATGCTTCCACGTAAAAAAGCAGGTAGAAATAAACCTTGGGAGATGCCTCCTGAGTTAGAACAGCTAGTTATAAAATATGCATTGAAAGAAATATACCAAGTATGGGGTAACTTAATCATTGGTGCCGGTATTGCTAATAAAACATTAGAAGTAGACGGTATCACAGAAACAATAGGAACTACTCAATCAGCTATGTATGGTGGAGCTAGTGCTCAGATACTTCAAATAAATGAAGATATAAAAGAACTATTGGATGGTTTAAGAGCTTACTTTGGATATAATATGATAGGATTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
462f15f0bd28ab42f8ce5c8be0206bdef202698e6a58e886929a86ac3f3f09ae
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7225
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Efficacy of two virulent bacteriophages, qdsa001 and qdsa002, against Staphylococcus aureus biofilms and their genome analysis Lv,X., Wang,J. and Lin,H. 2021-08 — GenBank