Protein
View in Explore- Genbank accession
- WAX23314.1 [GenBank]
- Protein name
- tail fiber protein
- RBP type
-
TFTSPTSP
- Protein sequence
-
MGLNFTPITENSTIADLTKQVNGIGSVLTEDRNIFEVTTDLQTDIGKAQKVKLTSDRGLAKDIGYTNYLREIKKVGLYYIGARTVATMYDKPDMENLDVLLQVLSLDNDDRVVQILHTLSTADSKVKILYRFVNSYQTSQWQVVQSLPNDKFTTQIGGSPFDINTQGTYFVSSMSDMPNGVHEGFLQVSIDNNDNRLLRLTDIDTGKEYLNVRKEYGNWGSWRTDLDVQKLSRYIVSNVNGDIENNNYSLSVYTADNITFQQAIAKHIEETNKTVFTFYIQGGVVGSPSSVSCRGIFISDSNNFSNIYGVYTAIGTDGRTINGSVNGNSWNTTKTLPGFKELWNGAHNFKDTSKKETMADSISNYQYVEIYTRYRALQNTKGTDRTGTLCHKFYIDGDGIYTCSGAYVSGDSNVGVEYYRVTLAINGDTWTVKDSAVNNNKDQYVTRVVGIALP
- Physico‐chemical
properties -
protein length: 454 AA molecular weight: 50708,83560 Da isoelectric point: 5,39478 aromaticity: 0,10352 hydropathy: -0,41938
Domains
Domains [InterPro]
DC_1773
STR
10–255
STR
10–255
DC_0448
STR
194–453
STR
194–453
1
454
Architecture
STR 10-453 |
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
454
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 322 | 322 | 0,7526 |
| Central domain | 323 | 443 | 122 | 0,0284 |
| C-terminal | 444 | 454 | 10 | 0,9958 |
Note: Constraints were applied during segmentation.
Fixed 77 C-terminal predictions appearing before Central domain|C-terminal too short, adjusted boundary
Fixed 77 C-terminal predictions appearing before Central domain|C-terminal too short, adjusted boundary
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-322
1-322
Central
323-443
323-443
C-terminal
444-454
444-454
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
Staphylococcus phage vB_SauM_VL10 [NCBI] |
3003699 | Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes |
| Host |
Staphylococcus aureus [NCBI] |
1280 | cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales |
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
WAX23314.1
[NCBI]
Genbank nucleotide accession
OP940114.1
[NCBI]
CDS location
range 90202 -> 91566
strand +
strand +
CDS
ATGGGTTTAAATTTTACACCTATAACAGAAAACAGTACTATAGCTGACCTAACAAAACAAGTTAATGGTATTGGCAGTGTACTAACGGAAGATAGAAATATTTTTGAAGTGACGACAGACCTACAAACAGATATAGGTAAAGCTCAGAAAGTTAAGTTAACAAGTGATAGAGGGCTAGCTAAAGATATAGGGTATACAAACTACTTAAGAGAGATAAAAAAGGTAGGGCTATATTATATAGGAGCCAGAACAGTAGCTACTATGTATGATAAACCTGATATGGAAAATTTAGACGTATTACTACAAGTGCTATCTTTAGATAACGATGATAGGGTTGTGCAGATATTACATACATTATCTACAGCAGATTCTAAAGTAAAAATATTATATAGATTTGTTAACAGTTACCAAACATCACAATGGCAAGTAGTTCAAAGTTTACCTAATGATAAGTTTACGACACAAATTGGAGGTAGTCCTTTTGACATTAACACGCAAGGTACATACTTTGTGTCTAGTATGTCTGATATGCCGAATGGTGTACATGAAGGATTCCTACAAGTTAGTATAGATAACAATGATAATCGTTTATTACGATTAACAGATATTGATACAGGAAAAGAGTATTTGAATGTTAGAAAAGAGTACGGTAATTGGGGTAGTTGGAGAACAGATTTAGATGTTCAAAAACTAAGTAGATATATCGTATCTAATGTGAATGGTGATATAGAAAACAATAACTATTCTTTGTCTGTGTATACCGCGGATAACATAACATTCCAACAAGCAATAGCTAAACATATTGAAGAGACAAATAAAACTGTTTTTACTTTTTATATACAGGGTGGCGTTGTAGGTTCCCCATCTAGTGTTAGTTGTAGAGGTATATTTATATCAGACTCAAACAATTTCAGTAATATATACGGTGTCTATACTGCAATAGGTACGGATGGAAGAACTATTAATGGTTCTGTAAATGGTAATTCATGGAATACAACAAAAACATTACCTGGTTTTAAAGAATTATGGAATGGCGCACACAACTTTAAAGATACAAGTAAGAAAGAAACTATGGCAGATTCTATATCTAATTACCAATATGTAGAAATATATACAAGATATAGAGCTTTACAGAATACAAAAGGTACTGATAGAACAGGTACCCTATGTCATAAGTTTTATATAGATGGGGATGGTATTTATACATGCTCAGGAGCTTATGTATCTGGTGACTCTAATGTAGGTGTTGAGTATTATCGAGTAACGTTAGCTATTAATGGTGATACATGGACGGTTAAGGACAGTGCAGTTAATAATAATAAAGACCAATATGTTACACGTGTTGTAGGTATTGCTTTACCGTAG
Genome Context
Genome Context
Tertiary structure
PDB ID
17bb2533170c19c62a8b159fc89750896e2d6a15003c7d50e6f3e8e652c5bcdb
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50