Protein

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Genbank accession
WYC18270.1 [GenBank]
Protein name
tail spike
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSNVTTPTNLPIPSQDPRDLKWNSGKMDEVMTSDAHYYLDRFGVKRWTIAGFQFTAEEAIRNYGYITIDSFEDGATLTLPNQVLRYEATGEYYRWDGAFPKTVAVGSTPESTGGVGVGAWLSVGDASLRNDIAIRNSIRDLLLSQPVSGIAITVKGYVPGTNFGGGQFYWDSSKPKSQHNGITIFSPTVPWDGSYAGLAAFLAGTGETDGSGTGCWMRSTSVFDAIHTAWAGHDITGDNSSNVSVKAAILLSSTIGIGCRISAGKYKPYFDTAIAYKDKFLVTRQTAIYLENLDINIYADNDVEIDISSSTAGERVVFGLKNCRGSVSGFNWNSNFTDYSTGPSDTTYKPQEDWMGFVLEGCHIKIKKQNVNASRTFINADATEGVANLYVSLTDSYFKYNVNYCVATRNCDYSEFINNETWYSGRTWHTFGEDYAISEGSRRSYAHNNRFYNPISIQSRIPPAGENITITDNYYEGHGIFVEIFAANNVICTGNTSKITTDAVGRNSAHYLLITNDPGGDWGVNTGLSNIVISDNIMIGGGMAVQGYNEGVQLKTGLIVTDNILIDTKAPRLTASSWIAPIFANNNCKFAVGFGDVGIGGYHPRVINNVLDGGYISISPGYTIISPEFESNQFRNSVGSTLDTVFSMNDFTGGVFRNNNIAASSFTRIFPAVADVTKVGFKFADIGFSQSPTGVYGVKCVVQPADWIVSDGATTYGSPVAWVGATTGVFLQINSAV
Physico‐chemical
properties
protein length:737 AA
molecular weight: 79926,97620 Da
isoelectric point:5,09575
aromaticity:0,11940
hydropathy:-0,15387

Domains

Domains [InterPro]
DC_1559
ATT
1–144
DC_1559 DC_0317
G3DSA:2.10.10.80
ATT
64–134
G3DSA:2.10.10.80
IPR040775
RBD
68–125
IPR040775 DC_0717
WYC18270.1
1 737
Architecture
ATT
STR
ATT 1-238 | STR 239-737
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WYC18270.1
1 737
Domain Start End Length (AA) Confidence
N-terminal 1 240 240 0,9940
Central domain 241 715 476 0,9816
C-terminal 716 737 21 0,6677
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-240
Central
241-715
C-terminal
716-737

Taxonomy

  Name Taxonomy ID Lineage
Phage Citrobacter phage vB_CfrS_K1M
[NCBI] 		3135597 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Citrobacter freundii
[NCBI] 		546 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WYC18270.1 [NCBI]
Genbank nucleotide accession
PP537791.1 [NCBI]
CDS location
range 9556 -> 11769
strand -
CDS
ATGTCTAACGTAACAACACCAACTAACCTTCCGATACCGTCACAAGACCCTAGAGATTTGAAATGGAACAGCGGGAAGATGGACGAGGTCATGACTTCTGATGCGCATTACTATTTGGACAGATTTGGCGTAAAAAGATGGACGATTGCAGGGTTTCAATTCACCGCAGAAGAGGCTATCCGCAACTATGGCTATATCACAATAGATAGCTTCGAGGATGGCGCAACACTTACTCTACCAAACCAAGTGTTGCGATATGAAGCAACTGGAGAATACTACCGTTGGGATGGTGCATTTCCTAAAACTGTAGCTGTTGGCTCAACCCCCGAATCTACTGGTGGCGTTGGTGTTGGTGCATGGTTAAGTGTTGGTGATGCTTCATTAAGAAATGATATTGCAATCAGAAACTCAATAAGAGATTTACTGTTATCACAGCCAGTATCAGGTATTGCAATAACAGTGAAAGGCTATGTCCCTGGCACTAACTTTGGTGGTGGTCAATTCTACTGGGATTCATCAAAACCAAAGTCACAGCATAACGGTATCACCATATTCAGCCCTACAGTGCCATGGGATGGTTCGTATGCTGGTCTGGCTGCGTTCCTCGCTGGTACTGGTGAGACTGACGGTAGTGGAACAGGATGCTGGATGCGCTCTACAAGTGTATTTGATGCCATACATACCGCTTGGGCTGGTCATGACATCACAGGGGATAATAGTAGTAATGTGTCAGTAAAAGCGGCAATTTTACTTTCTTCTACTATTGGTATTGGATGCCGTATCAGTGCTGGCAAATATAAACCTTATTTTGATACTGCTATTGCCTATAAAGATAAATTTCTAGTAACGCGTCAAACTGCTATCTATCTTGAAAATCTAGATATTAATATATATGCAGACAATGATGTAGAAATTGATATCAGCTCTAGTACGGCAGGAGAACGCGTTGTATTTGGTTTAAAGAACTGCCGTGGCTCCGTATCTGGATTTAATTGGAATAGTAATTTCACAGATTATTCCACAGGACCTTCCGATACTACTTATAAACCACAAGAAGATTGGATGGGATTTGTATTAGAAGGTTGCCATATAAAAATAAAAAAACAAAATGTAAATGCTTCAAGGACATTCATTAATGCTGATGCGACGGAAGGAGTAGCTAATCTATATGTTTCACTAACAGATAGTTATTTTAAGTACAATGTTAACTACTGTGTTGCAACTAGAAATTGTGACTATTCTGAATTTATTAATAATGAAACGTGGTATTCAGGTAGGACATGGCACACCTTCGGTGAAGATTATGCAATATCGGAGGGTAGCAGAAGGTCGTATGCTCATAACAATAGATTTTACAACCCTATTTCTATACAGTCTCGTATTCCACCTGCCGGAGAGAACATAACAATTACAGATAATTACTATGAAGGTCATGGTATATTTGTAGAGATATTTGCTGCTAATAATGTTATTTGTACTGGTAATACAAGTAAAATCACGACTGATGCAGTTGGAAGGAACTCAGCACACTATCTGCTTATAACTAATGACCCGGGTGGTGATTGGGGTGTTAATACTGGTCTAAGCAACATAGTTATCAGCGATAACATCATGATTGGTGGCGGAATGGCTGTACAAGGTTATAATGAAGGGGTTCAGCTAAAAACAGGATTGATAGTAACTGACAACATACTCATAGATACGAAAGCTCCGAGACTTACTGCGTCATCCTGGATAGCTCCGATATTTGCAAATAATAACTGTAAATTTGCTGTTGGTTTTGGTGATGTAGGTATTGGCGGTTACCACCCCAGAGTAATAAACAATGTATTAGATGGTGGCTATATAAGCATTAGTCCTGGTTATACCATTATATCTCCAGAATTTGAAAGTAATCAATTTAGAAATTCTGTAGGATCTACATTAGATACTGTGTTCTCCATGAATGATTTCACTGGCGGAGTTTTCAGAAACAACAACATTGCAGCATCATCATTCACACGTATATTTCCAGCAGTTGCAGATGTAACAAAGGTTGGCTTTAAATTCGCTGATATTGGTTTCAGTCAATCACCCACGGGGGTTTATGGTGTGAAATGTGTTGTTCAACCTGCTGACTGGATTGTTAGTGATGGTGCTACTACTTATGGTAGTCCAGTTGCATGGGTTGGGGCTACTACGGGAGTATTTTTACAAATTAATTCAGCCGTATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
6d978590ce815694d1bf30b6ec00034182e31327bf67ad9f9af55347035e69c9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7705
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50