Protein

View in Explore
Genbank accession
WWO60372.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MIDDGQFSTKPMRAEYQWQVGRRTKPFLAYDMGAATLRDPEGGLLQFLWTAEFRDGSVWLGREGVEQVKLFDYPGLNSLSLTFDTAMNPCVAVDNGTNPQLWYYDSAAGANVFYDVPGRTPFVCLDERRPEFSDISDIILTYLRGDKIYQRMQRDRYTIERDHQPSLPAPVVLTDKCRITAFSATRGGRMQWRIKP
Physico‐chemical
properties
protein length:196 AA
molecular weight: 22491,23440 Da
isoelectric point:5,89167
aromaticity:0,12245
hydropathy:-0,47755

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Stenotrophomonas phage SB2
[NCBI] 		3117468 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Stenotrophomonas maltophilia
[NCBI] 		40324 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Lysobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WWO60372.1 [NCBI]
Genbank nucleotide accession
PP079416.1 [NCBI]
CDS location
range 38175 -> 38765
strand +
CDS
ATGATTGACGACGGCCAGTTCTCCACAAAGCCAATGCGTGCTGAGTATCAGTGGCAGGTTGGCCGTCGCACGAAGCCGTTCCTCGCATACGACATGGGCGCAGCCACGCTCCGTGATCCCGAAGGCGGGCTCCTACAGTTCCTGTGGACTGCGGAGTTCCGCGACGGCTCGGTGTGGCTTGGGCGTGAGGGTGTCGAGCAGGTAAAACTGTTCGACTACCCCGGCCTGAACTCCCTGAGCCTGACCTTCGACACTGCGATGAATCCGTGCGTGGCAGTAGACAACGGGACCAATCCCCAGCTGTGGTACTACGACTCGGCTGCGGGTGCCAACGTGTTCTACGACGTGCCCGGGCGTACGCCTTTCGTCTGTCTTGACGAGCGTCGTCCTGAGTTCAGCGACATCAGCGACATCATCCTCACGTACCTGCGTGGTGACAAGATTTACCAGCGCATGCAGCGTGACCGATACACCATCGAACGCGACCACCAACCCAGCCTACCGGCCCCGGTCGTGCTCACCGACAAGTGCCGCATCACAGCCTTCTCCGCTACTCGCGGCGGTCGTATGCAGTGGCGCATCAAGCCCTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
e60d15f897e071ce7c5a649ca4dc028d72d07f9e0780b73a367ad5f2e3ffb093
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6043
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Novel lytic viruses for Xanthomonas sp. and Stenotrophomonas maltophilia Petrzik,K., Brazdova,S., Sovova,L. and Neoralova,M. 2023-07-17 — GenBank