Protein

View in Explore
Genbank accession
UAW59061.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,57
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MAGYTRQSIADIINGADITAPPVNAEFNQLTAAFNGATGHSHDGSTGNAPKIDLATSVSGYLPAVHGGIGGKNNFAATTNPLATDDAGEGYAPGSMWENTTTGRVFICVGNTANAAVWRELVQVQTANKIIPEATDTVDLGEPSTRFQDLWLSGGLSAFGNGSLGGTLTVTGATALSSTLAVTGTSTFTGTVTSNAINATTVAASGGFTGALTGNVTGDLTGNVTGNVTGDLTGDVTGDITSSGTSTFNNLDATGTTTITSGDINSGAMDGTTIGAATPAAGTFTNLTANTSLTAATADINGGTVDNATIGATTPSTGAFTTISTSGQATLASADINGGSIDGATIGATSHTSGKFSTLQSTGNATLATADINGGTIDGTAIGSTTASSGAFTTVSATGGITGDLTGDVTGNVTGNVTGAITGNVTGDLTGNVTSSGTSTFNNVTIDGTLNMNAGTTATITNLSAPTNDNDAARKIDVDNAVANLVDSAPGTLDTLNELAAALGDDADFSTTITNSIATKLPLAGGTMTGAIAMSTNKITGVGDPTAAQDVSSKAYVDQQDGLQVTKSGDSMSGNLAMGSNNITGLATPTANDHAVNKSYADNILGSATAAATSASNAATSESNAATSETNAGNSAASAAADLSSVQSLYDQFDDRYLGSKASAPTVDNDGNVLLSGALYFNSTANIMYVYGGSGWVPAGSSVNGTSDRVTYTASAGQTVFAATYDAGYVDVYLNGVKLLAGTDFTATNGTSVALTTGAAVNDVVDIVAYGTFTLADHYTKTQTDARYVEVAGDTMTGDLNITGTLTSDGLTVDGAASIGSSTAKTKFYSDSTYNGIYNGANLYANESIYMGAGNLYFYTATDQRMLIAPNGDISFYDTSGNAKFCWDASDVKLGVGTSNPNFEIHVYDPLSHAEIHVGTSASSDAQVPAFSLSNTASTWSMGIKGDDNLHFRENSASYQSRMVIAEGGSVGINKTLPSASYKLDISGNMRLTGTAGTIRLEADDTSLGAEQSIGRLEMYANDTSGNGTGVAGFIESVAIDAYGVNTALSFGVRQSGSAVAQERIRLQRQGAFIHSAIDGGDFTVNAGGYDADFRVQSNSNSNAFVVDAGTNIVSIGAGTDVADNVQPKLSVTTPWKASTSTTYDGTLSLVATGGGASGGRGPQIIFTGEDGPSARTLAKIDAIKENSTSGDHDGALIFRTRKNASSLVARLHLLSYAAIFNDDSDDTDFIVESNSSSNAFVVNAGDNTVTMFKGALGDGTVGHDFRSNGQTTFVCNNSVRNLNLNNISGATHSAIGFQYNTVIKGSVTVSSTGTTYNTTSDRRLKDNIEPIANGTEKLMAMKPVTHTWKADPNTGETVHGFIAQEMQEIVPEAVSGDPDGEEMMSMDYGRITPVIVAALQDAHKKIEALEERLAEMET
Physico‐chemical
properties
protein length:1419 AA
molecular weight: 143963,05640 Da
isoelectric point:4,30762
aromaticity:0,06131
hydropathy:-0,12565

Domains

Domains [InterPro]
DC_1798
ATT
1–479
DC_1798 DC_2093 DC_1985
IPR030392
CHP
1321–1414
IPR030392
IPR030392
CHP
1321–1375
IPR030392
UAW59061.1
1 1419
Architecture
ATT
STR
RBD
ATT 1-479 | STR 525-869 | RBD 1174-1419
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UAW59061.1
1 1419
Domain Start End Length (AA) Confidence
N-terminal 1 236 236 0,2498
Central domain 237 663 428 0,3996
C-terminal 664 1419 755 0,7598
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-236
Central
237-663
C-terminal
664-1419

Taxonomy

  Name Taxonomy ID Lineage
Phage Roseobacter phage CRP-235
[NCBI] 		2873406 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Rhodobacteraceae bacterium
[NCBI] 		1904441 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Alphaproteobacteria > Rhodobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UAW59061.1 [NCBI]
Genbank nucleotide accession
MZ892989.1 [NCBI]
CDS location
range 30888 -> 35147
strand -
CDS
ATGGCAGGTTACACACGCCAAAGTATTGCTGACATTATTAACGGGGCAGATATCACTGCACCGCCAGTTAATGCGGAATTTAACCAACTTACTGCAGCGTTTAATGGCGCTACAGGTCACAGCCATGACGGATCTACAGGCAATGCGCCTAAGATTGATCTAGCTACATCCGTCAGTGGATACCTTCCTGCTGTACACGGTGGTATTGGTGGCAAGAATAACTTTGCTGCTACAACAAACCCTCTGGCTACAGACGATGCTGGTGAGGGCTATGCTCCAGGCTCCATGTGGGAAAACACCACAACAGGTCGTGTATTCATCTGTGTAGGCAATACCGCCAACGCAGCCGTTTGGCGTGAACTGGTACAGGTTCAAACAGCCAACAAGATTATACCTGAAGCTACAGATACTGTGGACCTTGGTGAGCCTTCTACACGCTTCCAAGACCTTTGGTTGTCTGGCGGCTTGTCTGCATTTGGTAACGGCTCTTTGGGCGGTACTCTGACAGTTACAGGTGCTACAGCACTTAGTTCTACACTTGCGGTTACAGGCACCTCCACATTCACAGGCACCGTTACCTCAAACGCAATTAACGCTACAACTGTAGCAGCTTCGGGTGGCTTCACAGGCGCTCTGACAGGCAACGTAACAGGTGACCTGACGGGGAATGTAACTGGAAACGTAACAGGTGATCTCACAGGCGATGTTACTGGGGACATTACGTCTTCGGGTACTTCTACCTTTAACAACCTAGACGCCACAGGCACCACTACAATCACATCAGGTGATATTAACTCTGGTGCGATGGATGGTACTACTATCGGTGCGGCTACTCCTGCCGCTGGTACGTTCACTAACCTGACAGCCAATACAAGCCTCACAGCGGCTACAGCCGACATTAACGGTGGTACGGTAGATAACGCTACAATCGGTGCTACAACACCGTCTACAGGCGCTTTCACAACGATCTCTACATCTGGTCAAGCTACACTAGCATCTGCTGACATTAACGGTGGCTCTATTGATGGCGCTACAATCGGTGCTACCAGCCATACGTCGGGTAAGTTCAGCACGTTGCAGTCTACAGGCAATGCCACACTGGCTACTGCTGACATCAACGGCGGTACTATCGACGGTACAGCTATTGGTTCAACTACAGCCTCTTCTGGTGCATTCACTACAGTATCAGCCACAGGCGGTATCACAGGTGATCTTACAGGCGATGTAACGGGTAACGTAACTGGTAATGTTACTGGCGCAATCACAGGCAACGTCACGGGTGATCTAACAGGCAACGTAACTTCCAGCGGTACATCCACGTTCAACAACGTAACCATCGACGGTACGTTGAACATGAATGCTGGTACAACTGCTACCATTACTAATCTTTCTGCGCCAACAAACGATAATGATGCAGCACGAAAAATAGACGTTGATAACGCTGTAGCTAATCTAGTTGATAGTGCTCCTGGTACACTAGACACACTCAATGAACTAGCGGCTGCGCTGGGTGATGATGCAGACTTCTCCACAACGATCACAAACAGCATTGCGACTAAGTTACCACTAGCTGGCGGCACCATGACAGGTGCAATAGCCATGTCCACTAATAAGATTACTGGCGTAGGTGATCCGACAGCGGCACAGGATGTTTCCAGTAAGGCTTATGTTGATCAACAAGACGGTCTGCAGGTTACTAAGTCTGGTGATAGCATGTCTGGTAACCTAGCAATGGGTTCCAATAACATCACTGGCTTGGCTACTCCGACTGCCAATGACCATGCTGTAAACAAATCTTATGCTGATAATATTCTTGGATCAGCGACAGCGGCGGCTACTTCAGCTTCTAACGCAGCGACTTCAGAATCCAATGCTGCTACATCAGAAACCAATGCAGGTAATTCGGCTGCATCTGCGGCTGCTGATCTATCGTCTGTACAAAGCCTGTATGACCAGTTTGATGATCGTTACCTTGGCTCGAAAGCATCTGCACCTACTGTAGACAATGATGGTAATGTATTGTTGTCTGGTGCGCTGTACTTCAACAGCACTGCAAACATCATGTACGTCTACGGCGGCTCTGGCTGGGTTCCTGCTGGTTCATCTGTGAACGGTACATCTGATCGTGTTACTTACACTGCAAGCGCTGGGCAGACAGTCTTTGCTGCTACTTACGATGCAGGTTACGTTGATGTGTACCTGAACGGCGTTAAGCTATTGGCTGGCACTGACTTCACAGCTACTAACGGTACATCTGTTGCACTGACTACAGGCGCAGCAGTGAATGATGTAGTAGACATTGTAGCTTACGGTACGTTCACCCTAGCAGACCACTACACTAAGACACAGACAGATGCTCGTTACGTTGAAGTAGCTGGCGATACTATGACAGGTGATCTGAATATCACGGGTACTTTGACCAGCGATGGGCTGACTGTGGATGGTGCCGCATCTATTGGCTCTAGCACGGCGAAAACTAAGTTTTATTCTGACAGCACATATAACGGCATTTATAACGGTGCAAACCTGTATGCGAATGAAAGCATTTATATGGGTGCTGGCAATCTTTACTTCTACACTGCAACAGATCAACGTATGCTTATTGCCCCAAACGGCGACATCAGCTTCTATGACACCTCTGGAAACGCAAAGTTCTGCTGGGATGCGAGTGATGTTAAATTAGGCGTAGGAACCTCAAACCCTAACTTTGAAATTCATGTCTATGATCCACTAAGCCATGCAGAAATACACGTTGGAACATCTGCTTCTTCTGATGCCCAAGTACCTGCATTTAGCCTAAGTAATACTGCCTCTACTTGGTCTATGGGTATTAAAGGAGATGATAATCTTCATTTCCGTGAAAACTCTGCAAGCTACCAATCTCGTATGGTCATAGCAGAGGGTGGTTCGGTTGGCATCAACAAGACCTTACCAAGTGCAAGCTACAAGTTAGACATAAGCGGCAATATGCGCCTGACAGGTACAGCGGGAACTATTCGCTTAGAAGCCGATGATACTTCTCTTGGTGCAGAACAGTCTATTGGTCGTTTGGAAATGTATGCAAACGATACAAGCGGTAATGGCACAGGCGTTGCAGGTTTCATTGAAAGCGTTGCGATTGACGCTTACGGTGTGAACACAGCCTTATCATTTGGTGTTCGCCAGAGTGGTTCAGCCGTTGCCCAAGAAAGAATACGTCTTCAACGTCAAGGGGCTTTCATACATAGCGCAATAGATGGCGGCGATTTTACCGTGAATGCAGGTGGATACGATGCCGACTTCCGTGTTCAAAGTAACAGCAACTCTAATGCGTTTGTCGTTGACGCTGGAACAAACATCGTTAGCATTGGTGCAGGTACAGATGTTGCAGACAACGTCCAGCCAAAATTATCCGTAACAACACCGTGGAAGGCTAGTACCAGCACTACTTATGACGGAACTCTTTCACTTGTAGCAACTGGCGGCGGTGCCTCTGGGGGGCGTGGTCCACAGATTATCTTTACGGGTGAGGACGGTCCGTCTGCCCGTACATTGGCTAAGATTGATGCAATTAAGGAAAACTCCACCTCTGGAGATCACGATGGGGCTTTAATTTTCCGCACCCGTAAAAACGCCTCTAGTTTAGTTGCTAGATTGCATTTGCTGTCTTATGCCGCAATTTTCAATGATGACAGCGATGACACCGATTTCATTGTCGAGAGTAACAGCAGCTCTAATGCTTTCGTGGTGAATGCAGGGGACAACACGGTAACTATGTTCAAAGGTGCTTTGGGGGATGGCACTGTAGGTCACGACTTCAGGAGTAACGGACAAACTACTTTTGTGTGTAACAATTCAGTTCGTAACTTGAACCTGAACAACATTTCAGGTGCCACTCATTCTGCTATTGGCTTCCAGTATAACACAGTTATAAAAGGTTCTGTCACTGTTTCATCTACTGGCACCACCTACAACACCACCTCAGACCGCCGCTTGAAGGACAACATTGAGCCTATCGCAAACGGCACTGAGAAGCTGATGGCTATGAAGCCTGTCACGCACACTTGGAAGGCTGATCCGAATACAGGTGAAACAGTCCACGGATTTATCGCACAGGAAATGCAGGAGATCGTCCCAGAGGCGGTATCAGGTGATCCTGATGGCGAAGAGATGATGTCGATGGATTACGGACGCATCACGCCTGTCATTGTGGCGGCATTGCAGGATGCACATAAAAAGATTGAGGCGTTGGAAGAACGTCTAGCAGAAATGGAGACTTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
b18f0319055593adf4b86a3103336e5a229d68035061e718062fdf524030041b
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,6557
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Newly identified HMO-2011-type phages reveal genomic diversity and biogeographic pattern of marine HMO-2011-type group Qin,F., Du,S., Zhang,Z., Ying,H., Wu,Y., Yang,M. and Zhao,Y. 2022-01-12 — GenBank