Protein

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Genbank accession
YAS69543.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,75
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MTEMKFAGAGGSKSKSPVRTADNLFSTDTVEAVLALSEGPIRGLADGMKSFNVGDTPLMTPDGSIMFDSFNLAAYSGKDGDAPVAFRFGGESSNQQVGVQLRQGTAVSRTTDATLRGKINRLEVRLVFSTLYMQNNDGVFEETARFQIAYRPAKQPLAWQYYNGQTESQVRGKTSSGYPKDFTIDVPVLADDDWVIQVTKYNGEDNTTSFVNMSWESFQMVTTSSRAYANVALLHLVAKATSQFSSVPAFSGVYDGMLMKVPSNYNPDLRLYDEAGGPWNGSFKEDWTNNPAWILYNLITNSRWGFARYYPTISANKFDFYAAAKWCDELVPNGRGGLQPRYTFNQAITDSQNALEMLSYIAGAFNAVVYDDASGAVHLRVDRWTEPTMLFTPETVSTEGFQYSFTDIATRYNDLTVSFVNPDLDWQQDVRGGIVFPDQIERNGRIPLEFQAIGCTDEHEALRRAWYRLITACTETTTVNFKTARAGLMVDPYDIIYVADPDAGWSTGGRIKSSLGDRIHLRDPLYMPAMKTYTMKVQVVDQLVTLTVQPVVTGNVYELQIVSGLLPTYVPELTPFTIEENGSFGYAKPFRVIDIQEAEGDPNLYTITALEINTNKYTAADNCQPVGSVQYSFKNPKTPPGPLNVTLESGTQYLQMGKDGSLTARIYASWQAPAGVMIERYEVSYRASGDQAWQPVPDVYGEAAYISPVTTGTAYDVMIESVSTLGYRSNPVIVYGHNVVGKSAPPSDVQNFRITRRPTDLLLQWDPIPDLDAFGYEIRQGLSWDEGQVLTTDLSATAFTHDQSEKGTYPYHIRAIDTSGNLSRNVTTFVLELEAPAPVEGFFAVPSGNRLEFHWKPNQEPNIAGYEIREGTTWGIGQFIAQVSASGYSIPSGSFGVRMFWIKAIASPGIYSDIAVFTNNVVAEPTDTNIVYYEDEKASGFSGLRHGMKVFGTSDLSMEDNVFRSEYLFPVSLPDTYRARNTVIFSLEARRDLPYTWGDATFTWDSLQAQVPWAYEGDLSTLTAEVQMSQQVGLVPTRGDVEGWRLDGSLAPLTVNTTVGPATNVTYADGRYGKGVKVGDFTRASWSTILPTTFNFSFWARPTLVADGVYLRLIGAYGPDQLRVRYDTKAAAFVLEDSTGKAAISVPYQLVVDEPVCLGVVQRASNRSLFVSSMDMKKTGQATGDFPPLATFGTVQIH
Physico‐chemical
properties
protein length:1198 AA
molecular weight: 132355,70770 Da
isoelectric point:4,84066
aromaticity:0,11686
hydropathy:-0,24683

Domains

Domains [InterPro]
DC_0463
STR
2–830
DC_0463 DC_1836
IPR053171
Unmapped
7–823
IPR053171
IPR055385
ATT
93–222
IPR055385 IPR032876 IPR013783 IPR013783
IPR036116
STR
666–727
IPR036116 DC_0960
YAS69543.1
1 1198
Architecture
STR
ATT
STR
ATT
STR
RBD
STR 2-92 | ATT 93-222 | STR 223-349 | ATT 350-511 | STR 512-931 | RBD 932-1041 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YAS69543.1
1 1198
Domain Start End Length (AA) Confidence
N-terminal 1 1061 1061 0,9393
Central domain 1062 1187 127 0,2989
C-terminal 1188 1198 10 0,0940
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-1061
Central
1062-1187
C-terminal
1188-1198

Taxonomy

  Name Taxonomy ID Lineage
Phage Ralstonia phage vB_RsoP_BMB116
[NCBI] 		3455927 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Ralstonia solanacearum
[NCBI] 		305 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YAS69543.1 [NCBI]
Genbank nucleotide accession
PX020966.1 [NCBI]
CDS location
range 56667 -> 60263
strand -
CDS
ATGACGGAAATGAAATTCGCCGGTGCCGGCGGTTCCAAATCGAAGTCGCCTGTACGTACGGCCGACAACCTGTTCTCGACCGATACCGTCGAGGCCGTGCTGGCCCTGAGCGAAGGGCCGATTCGCGGCTTGGCCGACGGGATGAAGAGCTTCAACGTCGGCGACACCCCGCTGATGACGCCGGACGGCTCCATCATGTTCGACAGCTTCAACCTGGCCGCGTATTCCGGCAAGGATGGGGACGCGCCGGTGGCCTTTCGCTTCGGTGGGGAGAGCTCGAACCAGCAGGTCGGCGTGCAGCTGCGCCAAGGCACCGCGGTGTCCCGGACGACCGATGCCACGCTGCGCGGCAAGATCAACCGCCTCGAGGTGCGGCTCGTCTTCAGCACGCTGTACATGCAGAACAACGACGGCGTCTTCGAGGAAACCGCGCGCTTCCAGATCGCGTACCGGCCGGCCAAGCAACCCCTTGCCTGGCAGTACTACAACGGGCAGACGGAATCCCAAGTCCGCGGCAAGACGAGCTCTGGTTACCCGAAGGACTTCACGATCGACGTGCCGGTGCTGGCCGACGACGACTGGGTGATCCAGGTCACGAAGTACAACGGCGAGGATAACACCACCAGCTTCGTGAACATGAGCTGGGAATCCTTCCAGATGGTCACGACCTCGAGCCGCGCGTACGCCAACGTGGCGCTGCTCCATCTCGTGGCCAAGGCCACCAGCCAGTTCAGCTCGGTCCCGGCCTTCAGCGGCGTCTACGACGGCATGCTGATGAAGGTGCCATCCAACTACAACCCGGACCTGCGTCTCTACGACGAGGCCGGCGGCCCGTGGAATGGCAGCTTCAAAGAGGACTGGACGAACAACCCGGCCTGGATCCTCTACAACCTGATCACGAACTCCCGCTGGGGCTTCGCGCGCTACTACCCGACCATCTCAGCGAACAAGTTCGACTTCTACGCCGCGGCAAAGTGGTGCGACGAGCTGGTGCCGAACGGCCGCGGGGGCCTGCAGCCGCGCTACACCTTCAACCAGGCAATCACCGATTCCCAGAACGCCCTGGAGATGCTGTCGTATATCGCCGGCGCCTTCAACGCCGTAGTCTACGACGACGCCTCGGGCGCGGTGCACCTGCGCGTGGACCGGTGGACCGAGCCGACGATGCTCTTCACGCCGGAGACCGTCAGCACCGAGGGCTTTCAGTACAGCTTCACCGACATCGCGACCCGCTACAACGACCTGACGGTGTCGTTCGTCAATCCGGATCTCGACTGGCAGCAGGACGTGCGCGGGGGAATCGTCTTCCCCGACCAGATCGAACGTAACGGCCGCATCCCGCTGGAGTTCCAGGCGATTGGCTGTACCGACGAGCACGAAGCCCTGCGCCGCGCCTGGTACCGGCTGATCACCGCGTGCACCGAGACCACGACCGTCAACTTCAAGACGGCGCGCGCCGGCCTGATGGTCGACCCCTACGACATCATCTACGTGGCCGACCCGGACGCCGGGTGGTCGACGGGCGGCCGCATCAAGTCATCGCTGGGGGATCGAATCCACCTGCGGGATCCGCTCTACATGCCGGCCATGAAGACCTACACCATGAAGGTGCAGGTGGTCGACCAGCTGGTGACGCTCACCGTACAACCGGTGGTGACCGGCAACGTCTATGAGCTCCAGATCGTCAGCGGGCTGCTGCCGACCTACGTGCCCGAGCTCACCCCATTCACGATCGAGGAAAACGGCAGCTTCGGCTATGCCAAGCCGTTCCGCGTAATCGATATCCAGGAGGCTGAGGGGGACCCAAACCTCTACACGATCACGGCGCTCGAGATCAACACCAACAAATACACCGCGGCCGACAACTGCCAGCCGGTGGGATCGGTGCAGTACTCGTTCAAGAACCCGAAGACGCCCCCCGGCCCGCTCAACGTGACGCTCGAGAGCGGCACGCAGTACCTGCAGATGGGCAAGGACGGCTCGCTGACCGCGCGCATCTACGCCTCCTGGCAAGCGCCGGCCGGCGTGATGATCGAGCGCTACGAGGTTTCCTACCGGGCCTCGGGCGACCAGGCTTGGCAACCCGTGCCGGACGTCTATGGTGAGGCCGCCTATATCTCTCCGGTAACCACCGGCACGGCCTACGACGTGATGATCGAGTCGGTCAGCACGCTCGGCTACCGCTCGAACCCAGTGATCGTCTACGGGCACAACGTGGTCGGCAAGTCCGCGCCGCCGTCGGACGTCCAGAACTTCCGGATCACACGCCGGCCGACCGACCTGCTGCTGCAGTGGGATCCCATCCCGGACCTGGACGCTTTCGGCTACGAAATCCGCCAGGGTCTGTCCTGGGACGAAGGCCAGGTGCTGACGACGGACCTGAGCGCCACGGCGTTCACCCACGACCAGAGCGAGAAAGGGACCTACCCCTACCACATCCGCGCGATCGACACGAGCGGCAACCTCTCCCGTAACGTCACCACGTTCGTCCTGGAGCTGGAGGCGCCGGCGCCGGTGGAGGGCTTCTTTGCCGTGCCATCTGGCAACCGCCTGGAGTTCCACTGGAAGCCGAACCAGGAGCCCAACATCGCGGGCTACGAGATCCGGGAGGGCACCACCTGGGGTATCGGCCAGTTCATCGCGCAGGTAAGCGCCTCCGGCTACTCGATCCCATCGGGTAGCTTTGGCGTGCGCATGTTCTGGATCAAGGCGATCGCCTCCCCCGGCATCTACTCCGACATCGCGGTGTTCACCAACAACGTGGTAGCGGAGCCGACGGACACGAACATCGTCTACTACGAGGACGAGAAGGCCTCCGGCTTCTCGGGTCTGCGGCACGGGATGAAGGTGTTCGGCACGTCAGATCTGTCGATGGAAGACAACGTGTTCCGCTCGGAGTACCTGTTCCCGGTCAGCCTGCCGGACACCTACCGCGCACGCAACACGGTGATCTTCAGCCTCGAAGCGCGCCGGGACCTGCCGTACACCTGGGGCGATGCGACCTTCACCTGGGACTCGCTGCAGGCGCAGGTGCCGTGGGCCTATGAGGGCGACCTCAGCACGCTGACGGCCGAGGTCCAGATGAGCCAGCAAGTCGGCCTAGTGCCCACCCGCGGCGACGTCGAGGGCTGGCGCCTGGACGGATCCCTGGCCCCGCTGACGGTCAACACCACCGTAGGGCCGGCGACCAACGTGACCTATGCGGATGGGCGCTACGGCAAGGGCGTCAAGGTGGGCGACTTCACCCGTGCTTCCTGGTCGACCATCCTGCCGACGACCTTCAACTTCTCGTTCTGGGCGCGCCCCACCCTGGTCGCCGACGGCGTGTACCTGCGCCTGATTGGCGCCTACGGACCTGATCAGCTGCGCGTGCGCTACGACACCAAGGCCGCGGCGTTCGTGCTCGAGGACTCCACCGGCAAGGCCGCGATCAGCGTGCCCTACCAGCTGGTGGTCGACGAGCCGGTCTGCCTGGGTGTGGTCCAGCGAGCGTCGAACCGCAGCCTCTTTGTGTCCAGCATGGACATGAAGAAAACCGGCCAGGCGACGGGGGATTTCCCCCCGCTCGCGACATTTGGGACGGTCCAAATCCATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
40010e154443365010f41e1f0d3a5b29db789e5b55cb592ec3ad2dbeb6a88856
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8508
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50