Protein

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Genbank accession
QBI83687.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MSLTMGPNTGLLINGAPGEGHYSELIRMLRWDDFLRQPVVKGRVATLPTTGQAEGDTYIFTGSGSNQNRLARWWATGATTAIWEYMPPRLGWRVQVANETTPSGQVKTYEYSGTAWVELVGGMSDAPSDGKRYARLNNAWAGLGAAAVADILGTVSQAGGVPTGAIYEGGSNANGSYVRLADGTQICSSSLLTFTAGSTSVGASWTFPASFVSPSLMFGTVVASGAGADYDSGVAARNLGAVYFNASTNSAALGFLCISSASFTPGAQTRNNRAIAIGRWF
Physico‐chemical
properties
protein length:281 AA
molecular weight: 29310,37990 Da
isoelectric point:7,74132
aromaticity:0,10320
hydropathy:-0,01957

Domains

Domains [InterPro]
DC_0857
STR
16–281
DC_0857
G3DSA:6.20.230.10
ATT
121–143
G3DSA:6.20.230.10
QBI83687.1
1 281
Architecture
STR
ATT
STR
STR 16-120 | ATT 121-143 | STR 144-281
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_Pae_CF5a
[NCBI] 		2563580 No lineage information
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBI83687.1 [NCBI]
Genbank nucleotide accession
MK511057.1 [NCBI]
CDS location
range 34480 -> 35325
strand +
CDS
ATGAGTCTTACGATGGGGCCGAACACTGGCCTGCTGATCAACGGCGCCCCCGGTGAGGGGCATTACAGCGAACTGATCCGCATGTTGCGCTGGGATGACTTCCTGCGCCAACCGGTCGTCAAGGGGCGCGTCGCCACGCTGCCCACAACCGGCCAGGCCGAGGGGGACACGTACATTTTCACTGGCTCCGGCTCCAATCAGAACCGCCTAGCGCGCTGGTGGGCAACGGGTGCGACCACGGCTATTTGGGAGTACATGCCACCCAGGCTGGGCTGGCGGGTGCAGGTCGCGAACGAGACGACGCCGAGCGGACAGGTCAAGACCTACGAGTATTCCGGCACGGCGTGGGTCGAGCTGGTGGGCGGTATGTCGGACGCGCCCAGCGACGGAAAGCGCTATGCCCGACTGAACAACGCATGGGCAGGCTTGGGGGCCGCTGCCGTCGCCGATATTCTCGGGACGGTCTCTCAGGCTGGCGGTGTTCCAACTGGCGCGATCTACGAGGGCGGCAGTAACGCGAACGGAAGTTACGTCAGGCTCGCAGACGGAACGCAAATTTGCTCCAGCAGCCTTTTAACGTTTACTGCGGGCTCAACGTCGGTGGGTGCGTCTTGGACGTTCCCAGCCAGTTTTGTATCGCCGTCGCTGATGTTTGGCACCGTTGTCGCATCGGGGGCCGGCGCAGACTATGACTCCGGCGTCGCGGCGAGGAACCTGGGGGCTGTTTACTTCAATGCATCCACAAACTCCGCTGCACTGGGGTTTCTCTGCATCTCGTCTGCATCGTTCACCCCCGGCGCCCAAACTCGCAATAACCGTGCTATCGCCATCGGGAGGTGGTTCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
cc1f9b6f8d98ba2a507ea574693a88a89883b5b7dc236341bf191b145fdc5eaa
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7592
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Mobilizing temperate bacteriophage communities and resolving individual phage genomes from cystic fibrosis and bronchiectasis Pseudomonas aeruginosa isolates Tariq,M.A., Everest,F.L.C., Cowley,L.A., Wright,R., Holt,G.S., Ingram,H., Duignan,L.A.M., Lanyon,C.V., Perry,A., Perry,J.D., Bourke,S., Brockhurst,M.A., Bridge,S.H., Soyza,A.D. and Smith,D.L. 2019 — GenBank