Protein

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Genbank accession
QZI81347.1 [GenBank]
Protein name
tail fiber
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,71
TF
Evidence RBPdetect2
Probability 0,88
Protein sequence
MAIYRQGQASMDAQGYVTGYGTKWREQLTLIRPGATIFFLSQPLQAAVITEVISDTSIRAITTGGAVVQKTNYLILLHDSLTVDGLAQDVAETLRYYQGKESEFAGFIEIIKDFDWDKLQKIQEDVKTNADAAAASQQAAKTSENNAKTSATNAANSKKGADTAKAAAESARDAANTAKTGAETAREGAETARDAANTAKAGAESARDQAEEYAKQAAEPYKDLLQPLPDVWIPFNDSLDMITGFAPGYKKITVGDDVITMPSDKVVNFKRASGATYINKAGVLTIADVDEPRFERDGLLIEGQRTNYFINSNSPELWNPNPGLEISKTKTDPLGFKYATFKPGEFSGGTGAYTVIAGLTPNKIPVVKNDMVTISFRAKGNNVRFGARFDKGDPLSAVAIAYIDCDSLGIHLSGGDIENIVAKNAVRVGEWVFVEVVYKITDETTHVRGVITIANKTGGGILDETSFMDLTTPQIEVGSCASSFIITEGSPTTRASDIVLIPIPMNWATPPICALMEVNVNWGAVNKMPNIEGSARLLNVSITGSTTEIQDESYMYFGLTSGGRRLIITNGKGSKTEYKAYGDRVKNKFVAGFIFTEEKKLQVVVDGVLGSESPSLWTKQRYIAGNINIGGQSASGNRHLFGHVKNLRIWHKALTDHQLGEIV
Physico‐chemical
properties
protein length:663 AA
molecular weight: 71592,87130 Da
isoelectric point:5,64448
aromaticity:0,07994
hydropathy:-0,23861

Domains

Domains [InterPro]
DC_1059
STR
1–662
DC_1059
G3DSA:2.60.120.200
STR
526–662
G3DSA:2.60.120.200
IPR013320
STR
553–661
IPR013320
QZI81347.1
1 663
Architecture
STR
STR 1-662 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QZI81347.1
1 663
Domain Start End Length (AA) Confidence
N-terminal 1 483 483 0,4660
Central domain 484 652 170 0,3710
C-terminal 653 663 10 0,9965
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-483
Central
484-652
C-terminal
653-663

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoS-G3B1
[NCBI] 		2865810 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QZI81347.1 [NCBI]
Genbank nucleotide accession
MZ234033.1 [NCBI]
CDS location
range 32513 -> 34504
strand -
CDS
ATGGCGATTTACAGACAAGGCCAAGCGTCTATGGACGCGCAAGGTTATGTAACTGGTTACGGTACAAAATGGCGTGAGCAATTAACCTTGATTCGCCCAGGTGCAACTATTTTCTTTCTTTCTCAACCTTTGCAAGCTGCTGTGATTACTGAAGTGATTAGCGATACAAGCATTCGCGCAATTACTACTGGCGGCGCGGTAGTACAGAAGACAAATTACCTGATCTTGCTTCATGACTCGTTAACGGTTGACGGTCTTGCGCAAGACGTAGCGGAAACGCTGCGTTATTACCAGGGGAAGGAATCTGAGTTTGCTGGATTTATTGAGATCATCAAGGATTTTGATTGGGATAAGCTACAGAAGATCCAGGAAGACGTAAAGACAAATGCTGACGCAGCAGCAGCAAGCCAGCAGGCAGCTAAAACCAGCGAGAATAACGCGAAGACAAGCGCAACAAATGCAGCGAATAGCAAGAAAGGTGCTGATACTGCAAAGGCTGCCGCTGAATCCGCGCGCGACGCTGCAAACACTGCAAAGACTGGCGCTGAAACAGCAAGAGAAGGCGCTGAAACTGCGCGTGATGCTGCGAACACTGCAAAGGCAGGCGCTGAAAGCGCGCGAGATCAAGCGGAGGAATACGCAAAGCAGGCCGCAGAACCTTACAAAGATTTATTGCAACCGTTGCCGGACGTGTGGATACCGTTTAATGATTCCCTGGATATGATCACCGGCTTTGCTCCTGGTTACAAAAAAATAACTGTTGGCGATGATGTGATCACAATGCCATCAGATAAGGTTGTCAACTTTAAGCGCGCATCCGGTGCAACTTACATAAATAAAGCTGGCGTGCTTACTATTGCAGATGTTGATGAACCTCGATTTGAAAGGGATGGTTTACTGATCGAAGGTCAGAGAACTAACTATTTCATAAATTCAAACTCACCGGAGTTATGGAATCCAAACCCAGGGCTTGAAATAAGCAAAACAAAGACCGATCCATTAGGCTTTAAATATGCAACATTCAAGCCAGGAGAATTTTCTGGTGGTACTGGTGCATATACTGTCATTGCAGGACTGACACCAAATAAAATACCAGTTGTAAAAAATGATATGGTAACTATATCTTTCAGAGCGAAAGGGAATAATGTTAGATTTGGTGCAAGATTTGATAAGGGCGATCCTCTATCTGCTGTAGCAATTGCATACATTGATTGCGATAGTCTAGGTATTCATTTGTCCGGTGGCGATATAGAAAATATTGTTGCAAAAAATGCTGTTCGTGTTGGTGAGTGGGTTTTTGTAGAGGTTGTGTATAAAATAACAGATGAAACAACTCATGTTAGAGGTGTTATTACAATTGCCAACAAAACAGGTGGTGGTATTCTTGATGAAACTAGCTTTATGGATCTTACAACCCCTCAGATTGAGGTTGGCTCGTGTGCATCATCATTCATAATAACAGAAGGATCACCAACAACAAGAGCTAGCGATATTGTGCTCATTCCAATTCCTATGAACTGGGCGACTCCGCCTATATGCGCATTGATGGAGGTTAATGTTAATTGGGGCGCTGTAAATAAAATGCCAAACATAGAAGGATCAGCAAGACTTCTAAATGTATCAATTACTGGATCTACAACTGAAATACAAGACGAGAGTTACATGTATTTTGGTTTAACAAGCGGAGGAAGAAGGTTGATAATCACTAACGGCAAAGGTAGCAAAACTGAATATAAAGCATATGGGGATAGAGTTAAGAATAAGTTTGTTGCTGGATTCATATTTACGGAAGAAAAAAAATTACAAGTTGTAGTTGATGGCGTTCTTGGCAGTGAGTCTCCTTCATTGTGGACTAAGCAACGATACATTGCAGGAAACATAAATATTGGCGGACAGTCTGCATCTGGTAACAGGCACTTGTTCGGACACGTCAAGAACTTGCGAATCTGGCACAAGGCACTAACAGATCATCAATTGGGGGAAATTGTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
138c416b4e986bc20e459001a83cca8288f77e72f7e9151bc434cc37a761a600
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7948
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Naturally bred epsilon2 phages have an improved host range and effectivity in uropathogenic E. coli over their ancestor phages Saez,D., Loose,M., Mutti,M., Visram,Z., Hitzenhammer,E., Dippel,D., Tisakova,L., Schertler,S., Wittmann,J., Corsini,L. and Wagenlehner,F. 2020-05-19 — GenBank