Protein

View in Explore
Genbank accession
WYW00676.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MATAPRTTVTFPLDGANRDFQIPFEYLARKFVQVTLVGVDRKILTLNIDYRFTQRTIVTLTKTWGPADGYSLIEIRRYTSATERLVDFSDGSILRAYDLNTSQVQSLHIAEEGRDIATDTIGVNNDGDLDARGRKIVNVADGTGDFDAVNLRQQKTWAGSALNQADRATREADRSTQQANASQASNAASAAQAQESLKWAVESSRHSGNAGQYAANSLKSSQDAAGSNASAAAQAQEATRQAGLATSNGAAQVNLATAQANRSRDEANRSSASATESTRQTGLATAQADRSRGEADRAKTEADKLGNLNALAAAIKSVVSPHFILQDGWTFSSDVIGVDALGSYKGGTINVRNQMALAGGLTAAGAISSQARISTTADVQAGGEVAASVTLRIRGQGSNAHLWFMDPNGVENALLYADPSGTMHMRSKSQGDTLTLNADRSVDVGTNLRVAGAASVAARQTVGELVSMGTVWAGAGNAWMASDGNIYGGVWGGYLSTYLSNNFNARQPRFHFQSGRVGIGAPGGSYRQFRVNFHQPMEGAIVQVTIFRPALHQAVGARGETWVDSIDVNGFTCWVHCEGGAVWDAYIDWTANQTVNVGG
Physico‐chemical
properties
protein length:599 AA
molecular weight: 63440,15870 Da
isoelectric point:6,33609
aromaticity:0,07012
hydropathy:-0,31736

Domains

Domains [InterPro]
IPR005604
ATT
1–131
IPR005604 G3DSA:6.20.70.20
DC_0474
STR
1–597
DC_0474
IPR011049
STR
116–153
IPR011049
WYW00676.1
1 599
Architecture
ATT
STR
ATT 1-131 | STR 132-597 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_PpuP-Vasula
[NCBI] 		3132639 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas putida KT2440 and
[NCBI] 		1481724 Heterolobosea > Eutetramitea > Lyromonadida > Psalteriomonadidae > Monopylocystis >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WYW00676.1 [NCBI]
Genbank nucleotide accession
PP496435.1 [NCBI]
CDS location
range 33612 -> 35411
strand +
CDS
ATGGCTACAGCTCCACGCACTACGGTTACGTTTCCACTTGATGGTGCGAACCGAGACTTCCAGATCCCTTTCGAGTACCTTGCGCGTAAATTCGTGCAGGTGACCCTCGTTGGTGTAGATCGGAAGATCCTGACCCTCAACATCGACTATCGCTTCACGCAACGCACCATCGTGACCCTGACTAAGACTTGGGGTCCTGCTGATGGTTACAGCCTGATTGAGATCCGTCGATACACCTCCGCCACTGAGCGGCTGGTTGACTTCAGTGATGGCTCTATCCTTCGAGCTTACGACCTGAACACCTCTCAGGTACAGTCGCTGCACATCGCTGAAGAAGGCCGTGACATCGCGACCGACACTATCGGCGTGAACAACGATGGGGACCTTGATGCCCGTGGTCGCAAGATCGTTAACGTGGCTGACGGCACTGGCGACTTCGATGCTGTGAACCTGCGACAACAGAAGACGTGGGCAGGCTCTGCGCTGAACCAAGCTGACCGGGCAACCCGTGAAGCCGACCGTTCGACCCAGCAAGCGAATGCCTCTCAGGCGTCTAATGCTGCCTCTGCGGCGCAAGCTCAGGAATCCCTTAAGTGGGCCGTTGAGTCCTCTCGCCATTCCGGCAACGCTGGGCAGTACGCTGCGAACTCCCTCAAGTCCTCTCAGGATGCTGCTGGGTCAAACGCATCGGCTGCTGCTCAGGCCCAAGAGGCCACACGTCAAGCAGGCTTGGCGACATCTAACGGTGCCGCTCAGGTGAACCTTGCGACCGCTCAGGCTAACCGCTCCCGTGACGAAGCCAACCGTTCCTCGGCAAGCGCTACAGAATCCACTCGACAGACCGGACTGGCAACTGCTCAGGCTGATCGCTCCCGTGGTGAAGCTGACAGGGCGAAGACTGAAGCGGACAAGCTGGGCAACCTTAACGCCCTCGCTGCGGCCATTAAGTCCGTAGTGTCGCCTCACTTCATCCTTCAAGATGGCTGGACGTTCTCTTCGGACGTCATTGGGGTTGACGCTCTGGGTTCCTATAAGGGCGGCACTATCAACGTGCGTAACCAGATGGCCCTCGCAGGCGGCTTAACGGCTGCTGGTGCTATCTCGTCCCAAGCCCGTATCTCGACCACTGCTGACGTACAGGCAGGAGGTGAGGTTGCGGCAAGCGTTACTCTACGCATCCGGGGTCAAGGGTCGAACGCTCACCTATGGTTTATGGACCCGAACGGCGTTGAGAATGCCCTACTGTATGCTGACCCGAGTGGCACCATGCACATGCGCTCCAAGTCTCAAGGCGATACGCTGACCTTGAATGCTGACCGATCCGTGGACGTAGGTACAAACCTGCGCGTGGCCGGTGCAGCTTCCGTTGCAGCCCGCCAGACAGTGGGTGAACTGGTCTCCATGGGAACAGTATGGGCCGGTGCAGGCAACGCATGGATGGCTTCTGATGGCAACATCTATGGGGGCGTATGGGGTGGCTATCTGTCCACGTACCTCTCCAACAACTTCAACGCACGTCAGCCTCGCTTCCACTTCCAATCGGGCCGTGTAGGCATCGGTGCGCCGGGTGGTAGCTACCGTCAGTTCCGTGTCAACTTCCACCAACCTATGGAAGGTGCCATTGTCCAAGTGACTATCTTCCGACCTGCTCTCCATCAGGCAGTAGGTGCCCGTGGCGAAACGTGGGTGGATTCGATTGACGTTAACGGCTTCACCTGCTGGGTCCACTGTGAAGGTGGTGCTGTATGGGATGCTTATATTGACTGGACTGCTAACCAAACCGTGAACGTAGGCGGCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
73a521d81308b98c11ea4875e5ef82c1886c716a676afc2fc53d8631ad828595
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7104
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of a phage collection against Pseudomonas putida Brauer,A., Rosendahl,S., Kangsep,A., Rikberg,R., Lewanczyk,A.C., Horak,R. and Tamman,H. — — GenBank