Protein

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Genbank accession
QMP19274.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MYRLKDIQKELATLVGWRQSYDRDAKIDESLTVSDSGVMFQDVHPLVTLRNIESIMPLDYYLRYPEYRDTDTYKPGDKVVYGKDVLTLRPDVWEAITENVGVEPSDGDNWKRYNPLSDYLRELNERAITNTVTRFINEKLIAGETKTLLERTNFFDGSGKINNEIDPTDSIVGYEILPVRSMGVTTKIEKIGLQFNKPGRVKLYLMHTSQVDPIKTFDLNYTKNGSYQWFDVGNDVLLPYMSEETSPGGLWYLCYYQKELPLGMYAINVSKDFSRDPCGTCNIGSVQAWRELTKYIRVSPYRVDSTQSEDGVKMWNIEMNMYTSAICYGLNVQLSVGCDITDFIIQSKYAFTHAVSLQMASYVLRELALNPNVRQNANQLNIDRETLLYEVDGNSQGRAQGIGYELKKAFEALSIDTKGMDRICLSCRNNGIRFKAT
Physico‐chemical
properties
protein length:437 AA
molecular weight: 50033,15970 Da
isoelectric point:5,24876
aromaticity:0,10526
hydropathy:-0,42906

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Bacteroides phage vB_BfrS_23
[NCBI] 		2733869 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Bacteroides fragilis
[NCBI] 		817 cellular organisms > Bacteria > Pseudomonadati > FCB group > Bacteroidota/Chlorobiota group > Bacteroidota

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QMP19274.1 [NCBI]
Genbank nucleotide accession
MT630433.1 [NCBI]
CDS location
range 28848 -> 30161
strand -
CDS
ATGTACAGATTAAAGGATATACAAAAAGAACTTGCCACGCTCGTAGGATGGCGGCAGTCGTACGATAGAGACGCTAAGATAGACGAAAGTTTAACGGTGTCCGATAGTGGTGTTATGTTTCAAGACGTTCACCCGCTTGTGACTCTAAGAAACATTGAGTCTATTATGCCACTTGATTACTATTTACGTTATCCGGAGTATCGGGATACCGACACTTATAAGCCGGGTGACAAGGTAGTTTACGGCAAGGACGTGTTAACGCTTCGTCCGGACGTATGGGAGGCAATAACAGAGAATGTTGGTGTAGAGCCTTCCGATGGTGATAACTGGAAACGGTACAACCCACTAAGCGATTATTTACGTGAATTGAACGAAAGAGCGATCACCAATACCGTTACTCGCTTCATCAATGAAAAGTTGATTGCAGGGGAAACAAAGACGCTTTTAGAGCGTACAAACTTCTTCGATGGTTCGGGTAAGATAAATAACGAGATTGACCCTACCGATAGCATTGTAGGATATGAAATATTGCCAGTCCGTTCTATGGGGGTAACAACCAAGATCGAAAAGATAGGTTTGCAGTTTAACAAGCCGGGAAGGGTAAAACTTTACCTTATGCACACCTCACAGGTAGACCCGATTAAGACGTTCGATTTGAATTATACTAAAAATGGTTCTTATCAATGGTTTGATGTCGGTAACGATGTGTTACTCCCTTATATGTCTGAGGAAACCTCACCCGGTGGTTTGTGGTACTTGTGTTACTATCAAAAAGAATTGCCTTTGGGGATGTATGCTATAAACGTCTCTAAGGACTTTTCACGTGACCCGTGCGGTACTTGTAATATCGGAAGTGTGCAGGCGTGGAGAGAGCTAACAAAGTATATCAGAGTGTCTCCGTATAGAGTTGACTCTACGCAGTCGGAGGATGGTGTAAAGATGTGGAATATAGAAATGAACATGTATACGTCTGCAATCTGCTACGGTTTAAACGTTCAATTGTCGGTAGGATGTGATATAACTGACTTTATCATTCAGTCTAAGTATGCATTCACGCATGCCGTTTCTCTGCAAATGGCTTCTTATGTGCTGCGAGAGCTTGCATTGAATCCGAACGTTCGGCAAAATGCCAATCAATTGAATATCGACCGTGAAACACTATTGTACGAAGTTGACGGAAACTCACAGGGACGTGCGCAGGGTATCGGATACGAACTAAAGAAGGCTTTTGAGGCTCTTTCTATTGATACAAAAGGGATGGATAGAATATGTCTTTCTTGCCGGAACAACGGGATAAGATTTAAAGCAACATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
3a68b4808cbc9037cec80bef29f958edc66eafd5ae531ff433ef5b7fda9a6523
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8352
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome characterisation of a novel wastewater Bacteroides fragilis bacteriophage (vB_BfrS_23) and its host GB124 Tariq,M.A., Newberry,F., Haagmans,R., Booth,C., Wileman,T., Hoyles,L., Clokie,M.R.J., Ebdon,J. and Carding,S.R. 2020-10-23 — GenBank