Protein

View in Explore
Genbank accession
YP_003358910.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,74
Protein sequence
MAIVRKAGVLGVNTSTFTTGSSAISNNVYSPRQLVYTCPADCLRAEISLEVTNYSLGVFYRYELQKSGQPASSRMFIPILSVLDNKYRSLLWNTSYATPSGYDRGCKPTMLLPVFPGDQVYISVESLTSNTTAVFNTRVNGFEYNRTDASDDNFVPFWKTIRSETDYTINWDWMSDMGDFDYMELRYPIVSPTYPRRCYVVKRKVATDQYTALGTYYGLKGEPTLFNLEKANYNDTVQFPMMNSKIPMSAAANIIIGMKGRYT
Physico‐chemical
properties
protein length:263 AA
molecular weight: 29803,52420 Da
isoelectric point:8,52912
aromaticity:0,13308
hydropathy:-0,27643

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_003358910.1
1 263
Domain Start End Length (AA) Confidence
N-terminal 1 155 155 0,0002
Central domain 156 252 98 0,1535
C-terminal 253 263 10 0,9876
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-155
Central
156-252
C-terminal
253-263

Taxonomy

  Name Taxonomy ID Lineage
Phage Delftia phage PhiW-14
[NCBI] 		665032 Uroviricota > Caudoviricetes > Ionavirus >
Host Delftia acidovorans
[NCBI] 		80866 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_003358910.1 [NCBI]
Genbank nucleotide accession
NC_013697 [NCBI]
CDS location
range 53010 -> 53801
strand -
CDS
ATGGCTATCGTTCGCAAGGCGGGGGTGTTGGGCGTCAACACTTCCACGTTCACCACCGGATCCTCCGCCATTTCCAACAATGTCTACAGTCCGCGTCAGTTGGTGTATACCTGCCCTGCGGACTGTTTGCGTGCAGAGATTTCTCTGGAGGTCACCAATTACTCTCTCGGCGTCTTTTACCGATATGAGTTGCAGAAGTCGGGTCAACCGGCTTCTTCTCGGATGTTCATACCGATACTCAGCGTATTGGATAACAAATACAGGTCTTTGCTGTGGAACACCTCTTACGCCACCCCCTCCGGATACGATAGGGGCTGCAAACCCACCATGTTGCTGCCCGTGTTCCCGGGGGACCAAGTGTACATCAGCGTGGAATCCCTGACCTCAAATACCACTGCTGTTTTCAACACCAGGGTTAATGGGTTTGAATACAACCGGACGGATGCCAGTGACGACAATTTTGTCCCATTCTGGAAGACAATCAGATCGGAAACCGATTACACCATTAATTGGGATTGGATGTCTGACATGGGGGATTTCGATTATATGGAATTGAGATACCCGATTGTCTCGCCAACATACCCGCGTAGGTGTTATGTGGTAAAACGTAAGGTGGCGACAGATCAATACACTGCTTTGGGAACGTACTATGGCCTCAAAGGGGAACCTACGCTTTTCAATTTGGAGAAGGCCAACTATAACGACACAGTGCAATTTCCTATGATGAACTCAAAAATACCAATGAGTGCGGCTGCTAACATAATCATTGGTATGAAGGGGAGATACACATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
9774de287e06d372fcbba93f041d4d1d0c8111fe1babeee5571ece76714adff2
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4844
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50