Protein

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Genbank accession
QIW88525.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,87
Protein sequence
MSRPPRNGYTVNSDTELSVLDSALVPANTPLINFDRKCWGIYTDATSNLNASSGFEYIPQNDIDAYTLTSITISTDTYSLDLATVTQYLSITLATNTTLTVLNAGKYTKYFIELIPNGYTIKNFTDIFALPKQYSLATLLTAYFGKQVLELQYINKLYANLNYSDNVTKNAAVAFAEKINWTSPANKILYLAFAFSTTAYTGSGISSVSATVGSPSISKSRLLLGATGRLEATKTSTLDFNETDFTISFFSAKTSVGEYGCILGSHRASSIGFYVGVAADSTLFAIFGSNVLSCTLPDDIAEHSVIINRIGRVYKIFIDGILSTHLKAANNFNNNSTEPLCIGSLKNATGTPSWTSQSWQGYLRQLTINTAASIPFSANDVPPKDTLTASTVLLLKYNVSDLDFAQYNLTRSFTSNTTVQPLIASGRLNKYSHIGYTSSNLEITGNVTLEAKIYNPIGNTRGAIIDVEGGFTWGIYDLKLRITFGSFTLDGVTDIPDSTLVDVAFVRSGTTCSLFLNGELEATATTSEVMNAASSSSEFSIKRTYTQDTAIASINTSLFRSRSWIEIAQLRVTKDVRYTSNYIPDVSYSQ
Physico‐chemical
properties
protein length:590 AA
molecular weight: 64237,35580 Da
isoelectric point:5,56524
aromaticity:0,10847
hydropathy:-0,00424

Domains

Domains [InterPro]
IPR013320
STR
215–370
IPR013320 IPR013320
IPR013320
STR
225–370
IPR013320 G3DSA:2.60.120.200
G3DSA:2.60.120.200
STR
230–372
G3DSA:2.60.120.200
DC_2085
STR
349–568
DC_2085
QIW88525.1
1 590
Architecture
STR
STR 215-579 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QIW88525.1
1 590
Domain Start End Length (AA) Confidence
N-terminal 1 334 334 0,1809
Central domain 335 533 200 0,2524
C-terminal 534 590 56 0,8041
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-334
Central
335-533
C-terminal
534-590

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudanabaena phage PA-SR01
[NCBI] 		2723892 No lineage information
Host Pseudanabaena sp.
[NCBI] 		1153 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIW88525.1 [NCBI]
Genbank nucleotide accession
MT234670 [NCBI]
CDS location
range 88729 -> 90501
strand +
CDS
ATGAGTAGACCTCCACGCAACGGCTATACAGTAAACAGCGATACAGAATTGTCTGTGTTGGATTCTGCTCTCGTACCTGCAAATACACCGTTAATCAATTTTGACCGTAAATGTTGGGGCATTTATACTGACGCAACTAGTAATCTCAACGCATCTTCAGGTTTTGAGTACATACCTCAAAATGATATTGACGCTTACACACTCACCTCAATTACTATTTCAACCGATACTTACTCACTAGACCTCGCCACTGTAACTCAATATCTCAGCATCACCTTAGCAACCAACACAACCCTCACAGTCCTCAATGCTGGCAAGTACACCAAATATTTTATAGAGCTTATCCCGAACGGTTACACAATCAAAAATTTTACTGACATTTTCGCGCTACCTAAGCAATACAGCCTTGCAACCCTCCTCACTGCCTATTTTGGCAAGCAAGTTCTCGAACTACAATACATCAACAAACTTTACGCAAACCTCAACTACAGCGACAACGTAACAAAAAATGCGGCTGTCGCCTTTGCAGAAAAAATAAATTGGACAAGTCCTGCCAACAAAATCTTGTATCTGGCGTTTGCATTCTCAACAACTGCCTATACTGGTTCTGGCATCTCAAGTGTAAGCGCCACAGTAGGAAGTCCTAGCATCAGTAAATCGCGCCTATTACTTGGAGCTACTGGACGACTCGAAGCGACCAAGACTAGCACATTGGATTTCAACGAAACCGATTTTACTATCTCCTTCTTTTCTGCCAAAACGAGCGTAGGAGAGTATGGTTGCATCTTAGGTAGTCATCGCGCTTCCAGTATTGGGTTTTATGTAGGTGTAGCGGCTGATAGTACTTTGTTCGCTATCTTTGGGTCTAACGTACTTTCCTGCACCTTACCAGACGATATTGCTGAACATAGTGTTATCATCAATCGAATTGGTCGAGTTTACAAAATATTTATTGATGGAATCCTGAGCACCCATCTTAAAGCGGCTAACAATTTCAATAACAACTCGACCGAACCATTGTGCATTGGTAGTCTCAAAAATGCTACTGGAACGCCTTCGTGGACTTCGCAAAGTTGGCAAGGGTATTTACGACAACTTACTATCAACACAGCAGCCAGCATTCCGTTTTCTGCCAATGATGTTCCGCCCAAAGACACGCTCACTGCCTCTACTGTTTTACTATTGAAATATAATGTCAGTGACCTCGATTTTGCCCAGTACAACCTCACAAGAAGCTTCACATCGAATACTACAGTTCAACCACTCATCGCGTCAGGACGGCTCAATAAGTACTCGCATATTGGATATACCAGCAGTAACTTGGAGATAACTGGAAACGTTACACTAGAAGCAAAAATTTATAATCCGATTGGTAACACTCGCGGAGCTATTATTGATGTTGAAGGTGGTTTTACATGGGGCATTTATGACCTCAAGTTACGCATCACTTTCGGCTCCTTTACTCTTGATGGTGTAACTGATATTCCAGACAGTACGTTAGTTGATGTAGCTTTTGTACGTTCGGGAACAACTTGTTCTCTATTCTTGAATGGCGAACTTGAAGCAACTGCAACAACAAGCGAAGTAATGAATGCAGCCTCGTCAAGCTCAGAGTTTAGTATCAAACGTACTTATACTCAAGACACTGCGATAGCAAGCATCAATACTTCATTATTTCGCAGTAGAAGTTGGATTGAAATTGCACAGTTACGAGTTACCAAAGATGTACGATATACTAGTAATTACATACCTGATGTTTCTTACAGTCAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a48409bbb26f52ca202538043f94519ae9926388d9796202c67edecfdc40f680
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7001
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of first freshwater cyanophage infecting Pseudanabaena Zhang,D. 2020-08-17 — GenBank