Protein

Genbank accession
AWN09166.1 [GenBank]
Protein name
YomR
RBP type
TSP
Evidence DepoScope
Probability 0,93
Protein sequence
MPREDAAQFNGTLSTLTYPNKYSAVIPVEAPFYRIGLTLTVTDPATNTKRKLIEGLDYYLGHYFKDQAEAEQDAIYGSIMLLNATNIEYELLAVGRQYRIPASEIGKALVKTDLKDPRNSDWADLMKYPPIIAPIDPPKDLDEAILRDEVVKALNDIRLGIIARASELDEAFTDVTNLIFENGKKVFDDEMYQHHLNMNAHHYTCADIRALPVLGKAVDATKAFGRTLAELVDLMSTSGIQQKHVDMLLDNTLGDLLGRMRVLNNDAITFQTTTGHVISVKGEKFIITSPQPMFLKADQDNNDPGIATEFSAGLNTLYVHSGTAANVKAPVYNGVYLVTPDMVGLYLTSVKILPANAYFKSSDTLKIYGSGKQTNRVYMNAELPGATTTVEGLFAITNLSTSVAASTAISQKAVTDLKELLDNYVDDTYTINGKAFIKDSNGEMHLTLTAADFGVDKMNNTTPLAKPVTNALKTVLAGKVASDHTHTIADLDNVPYASTSTTGLAKLWDAIDTTADKMVTSRQGFLLDERINEMNEKISTLLPAWTVGGAQYGNQSFLPIPTVSNFAGFGFNRANPWGAARYEAGNVYMLRNGSDGPEDTRRVYYWYGNVDANNKFTNTYPTAFPYHPAGMSKFPGVTLLRVLTASEDVGLFEGSDGAKYLVLFNGTMNYAKHSEVYKVTFPDLTRTTGGALTYDSVMSFITVALAKTHVVFMMTHVTSDSFKVGGWSVALNALKGTDPIAFSVIPLSYAKMNGDVAQIVDDGAPENDNTATTRLAYVTQGARDKWTRTRTPVNYRPSFFSAAKLNNVRVRSEMHSYFADDKSASWSDAWSVVYNVDIDTGVLTVENPLFPVAITENKIEFPNGTRYKSVTNRNIGVAIYANLFANADFMIDSWSDVYSNNPTNISITPLAGTEFYDLLGSDTTLNESSNVQVIGAVGSVYKQYMRGIIHLGGAERTMLLRYLATSTCISMRYDLTNKYFPDAVGYGPDNLRVAQDISTYNEFALTPNVWKGNKLYLNGRVINAAGSYPYKNVDGTTTFTADRITVSDALWASLETAIGAALPLWNDAETIDKQFNVHTFDIGGLNAAFLVATCRTWENADHIRAYCRTTVWKIPMTVNSGNVSFGTTGWVVAVPEWRDGEAAISLMRDQVVNSKLVARDDGYVIQLGAIYRSGVVGDSRWRTYVMTCDQSFDNWTNTMRAFNPGIAEADLYIQPETGYIGYTKWLYLGLYVAADIYQNTSRTFATGTPVETYLAGVKTAEGWNLYITEEELLSFGSSRYTIPTYGVDIRDLYPTNYKNRTLYMHAVLNNGNPEYQLLEQQMPDTSTRLYIGYMTSDSERITFSNFDRVKRLGAVKQLLEHESVAYRHDMDVGRDQKLGRLGPLYKEPIGAIATDSSHGYLDSQQLSSVVAGQKRTRKGVSQVFSGLSQALITTQSNTAYKYWKKPTNIVSVTADESAEGAAYGMQWIGVPQPAVVPATTDMGILVRGKYIIPGTVGDSTAFDVRVLLPFGSSGTIINTEEPGVDVDMDNDPNALETPADGSVVTLRRYSPAGIACTITILVAIPKDPLTDFGLRDVAWQIVDLGGNVVAQGDESSYIGIVPLGTATLGTPVVFNARTYTFTDVDGAIPFVTTGAEGIAPALVSTPLGNGDTEITVAHHFMNERGEQKLDEVQVNLMFRT
Physico‐chemical
properties
protein length:1680 AA
molecular weight: 184335,63090 Da
isoelectric point:5,13855
aromaticity:0,09940
hydropathy:-0,16982

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage SPAsTU
[NCBI] 		2136797 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AWN09166.1 [NCBI]
Genbank nucleotide accession
MH221129 [NCBI]
CDS location
range 228721 -> 233763
strand +
CDS
ATGCCGAGAGAAGATGCGGCGCAGTTTAATGGTACACTAAGTACCCTTACTTACCCGAACAAATATTCGGCGGTGATTCCTGTAGAGGCACCGTTCTATCGTATCGGTTTAACTTTAACCGTAACCGACCCAGCAACAAACACGAAACGTAAGTTGATTGAAGGTCTCGACTATTACCTGGGGCATTATTTTAAAGACCAGGCAGAAGCCGAGCAGGATGCAATTTACGGCAGCATCATGTTGCTGAACGCAACCAATATTGAGTACGAACTGCTGGCTGTTGGCCGTCAGTATCGTATTCCGGCATCAGAAATCGGCAAGGCGTTGGTTAAGACCGACCTGAAAGACCCGCGTAACAGCGATTGGGCCGATTTGATGAAATACCCGCCTATCATCGCGCCTATCGATCCTCCGAAGGATTTGGACGAAGCTATCCTGCGTGATGAAGTTGTTAAGGCATTGAATGATATCCGTCTGGGGATTATTGCTCGTGCAAGTGAACTGGACGAAGCGTTTACCGACGTTACTAACCTGATTTTCGAAAACGGGAAGAAGGTTTTTGACGATGAGATGTATCAGCACCACCTGAACATGAACGCGCACCATTACACTTGTGCTGATATCCGCGCATTGCCGGTATTAGGTAAAGCCGTAGATGCGACGAAAGCGTTTGGCCGTACCCTGGCTGAGCTGGTTGACTTGATGTCGACGTCTGGCATTCAACAAAAACACGTTGACATGTTGCTGGACAACACACTCGGTGATTTGCTGGGGCGTATGCGTGTGCTGAATAACGACGCTATTACGTTCCAGACAACCACAGGTCACGTCATCAGTGTGAAGGGTGAGAAGTTCATCATCACTTCACCACAACCGATGTTTTTGAAAGCCGACCAGGATAATAACGATCCGGGGATTGCGACGGAGTTTAGTGCGGGGTTGAACACACTGTACGTCCACTCTGGGACAGCGGCTAACGTGAAAGCGCCGGTGTATAATGGGGTGTATCTGGTAACCCCGGATATGGTTGGGTTGTATTTAACCTCAGTAAAAATCCTGCCCGCAAACGCCTATTTTAAATCCAGCGATACGCTGAAGATTTATGGCTCGGGTAAGCAGACCAACCGCGTGTACATGAACGCCGAGTTACCAGGCGCAACCACTACGGTAGAAGGGCTGTTTGCAATTACCAATCTGTCCACGTCCGTAGCAGCATCCACCGCTATCTCGCAGAAAGCGGTAACCGACCTGAAAGAGTTACTGGATAACTACGTCGATGACACGTACACCATTAACGGTAAAGCGTTCATTAAAGACAGTAACGGTGAAATGCATCTGACGTTAACGGCTGCCGATTTTGGCGTTGACAAGATGAACAACACCACGCCGTTGGCTAAGCCGGTAACAAACGCACTGAAAACGGTGCTGGCCGGGAAGGTGGCGTCTGACCACACCCACACCATTGCCGACTTGGACAACGTGCCGTATGCTTCGACGTCGACGACAGGTCTGGCGAAACTGTGGGACGCAATCGACACAACCGCAGATAAGATGGTGACGTCGCGTCAGGGTTTCCTGCTTGACGAGCGCATCAACGAGATGAACGAGAAAATCAGCACACTGCTTCCTGCGTGGACGGTGGGTGGTGCCCAGTACGGGAACCAGAGTTTCTTGCCAATTCCAACCGTCAGTAACTTCGCTGGTTTCGGATTTAACCGTGCTAATCCGTGGGGTGCAGCACGCTATGAAGCGGGTAATGTCTACATGCTTCGTAACGGCTCTGACGGCCCGGAAGACACTCGGCGTGTTTATTACTGGTACGGCAATGTCGACGCGAACAACAAGTTCACCAACACATACCCGACCGCGTTTCCTTATCATCCAGCTGGGATGTCGAAGTTCCCTGGTGTAACGCTGTTGCGGGTATTAACGGCCAGTGAAGACGTCGGCCTGTTTGAGGGCAGCGACGGGGCGAAGTATTTGGTATTGTTCAACGGTACCATGAACTACGCCAAACATTCGGAAGTCTATAAAGTCACCTTCCCGGATCTCACCAGAACTACGGGTGGTGCGCTGACCTATGATTCAGTGATGTCTTTCATCACTGTGGCACTGGCGAAGACACACGTTGTCTTCATGATGACACACGTTACTAGCGATAGCTTTAAAGTGGGCGGGTGGTCTGTTGCGTTGAACGCATTAAAAGGGACAGACCCGATTGCCTTCTCCGTGATACCTCTCAGTTACGCGAAAATGAACGGTGATGTTGCCCAAATTGTTGATGATGGCGCGCCTGAAAACGACAACACCGCAACTACTCGTTTAGCGTACGTGACCCAGGGTGCCCGTGATAAATGGACTCGAACCCGCACGCCGGTTAACTACCGCCCGTCGTTCTTTAGCGCGGCGAAACTGAATAACGTTCGTGTGCGTTCTGAGATGCACTCGTATTTCGCGGACGATAAAAGCGCTTCGTGGTCGGATGCCTGGTCTGTCGTGTACAACGTGGATATCGACACGGGTGTATTAACTGTTGAGAACCCACTCTTCCCAGTAGCCATCACCGAGAATAAAATCGAGTTCCCGAACGGAACGCGTTATAAGTCAGTCACTAACCGTAACATCGGTGTGGCAATTTACGCAAACTTGTTCGCTAACGCCGACTTCATGATTGACTCTTGGAGCGACGTTTACTCGAATAACCCGACGAACATCTCAATCACACCGTTAGCAGGTACCGAGTTCTACGACCTGTTAGGAAGTGACACTACGTTGAACGAGTCCAGCAACGTACAGGTGATTGGGGCAGTAGGTTCGGTCTACAAGCAATACATGCGGGGAATTATCCATTTAGGTGGTGCAGAACGCACGATGTTGTTGCGCTATCTTGCGACCAGCACCTGCATTTCCATGCGTTACGACTTGACCAATAAATACTTCCCTGATGCAGTTGGCTACGGCCCTGATAACTTGCGTGTCGCGCAGGACATCAGTACCTACAACGAGTTCGCTTTGACGCCGAATGTCTGGAAAGGCAACAAGCTGTACCTGAACGGGCGGGTGATTAATGCGGCGGGAAGTTATCCTTACAAGAATGTCGACGGTACAACCACTTTCACCGCAGACCGGATTACCGTGTCTGACGCATTGTGGGCGAGCCTCGAAACCGCGATCGGTGCAGCACTCCCTCTGTGGAATGATGCTGAGACCATCGATAAGCAGTTCAACGTACACACCTTCGATATCGGAGGTCTGAACGCTGCGTTCTTGGTAGCGACCTGTCGTACCTGGGAAAACGCTGACCATATCCGCGCTTATTGCCGCACCACTGTCTGGAAAATTCCGATGACGGTGAATAGCGGTAATGTGTCGTTTGGTACAACGGGTTGGGTCGTGGCTGTGCCGGAATGGCGGGATGGTGAGGCAGCAATCTCACTGATGCGCGATCAAGTGGTGAACTCGAAGTTGGTTGCGCGAGACGACGGGTATGTCATTCAGTTGGGTGCTATATACCGCAGCGGTGTCGTTGGGGATTCACGTTGGCGTACGTACGTGATGACCTGCGATCAGTCGTTTGACAACTGGACAAACACCATGCGGGCGTTTAATCCGGGGATTGCTGAGGCTGATTTGTATATTCAGCCAGAAACGGGTTATATCGGCTACACCAAGTGGTTGTATCTGGGCCTGTACGTGGCTGCTGATATTTATCAGAACACTTCTCGAACGTTCGCAACTGGAACACCGGTTGAAACGTATCTGGCGGGTGTAAAAACTGCGGAAGGCTGGAACCTGTACATCACCGAGGAAGAGTTGCTGTCGTTTGGCTCGTCACGTTATACCATCCCGACCTACGGTGTGGACATTCGTGACTTGTATCCAACGAACTACAAGAATCGGACGTTGTACATGCACGCGGTGCTTAACAACGGTAATCCGGAATACCAACTGCTGGAACAACAGATGCCCGATACGTCAACGCGACTGTACATCGGGTATATGACCAGTGACTCAGAGCGCATCACGTTCAGTAACTTTGATCGTGTGAAACGTCTGGGTGCAGTTAAACAGCTTCTTGAGCACGAATCTGTTGCCTATCGTCACGATATGGACGTGGGTCGTGACCAGAAACTGGGCAGACTGGGGCCGTTGTATAAGGAACCTATCGGGGCCATCGCTACGGACTCCTCTCACGGGTATCTCGACAGTCAACAGCTCTCGAGCGTGGTGGCGGGACAGAAGCGCACCAGAAAAGGCGTCAGCCAGGTGTTTAGCGGATTGTCGCAGGCTTTGATTACTACACAGTCGAATACTGCGTACAAATACTGGAAGAAGCCAACGAACATCGTGTCGGTTACGGCGGATGAGAGTGCAGAAGGGGCCGCGTACGGAATGCAGTGGATAGGTGTCCCTCAACCGGCTGTTGTACCTGCAACAACCGACATGGGCATCCTCGTGCGTGGCAAGTACATTATCCCTGGCACGGTTGGTGATTCCACCGCGTTCGACGTTCGGGTTCTGCTTCCGTTTGGTTCTTCTGGTACGATCATTAATACCGAAGAGCCTGGGGTCGATGTCGACATGGACAACGATCCTAACGCTCTGGAGACGCCGGCAGATGGCAGCGTTGTAACGTTACGACGTTACTCCCCCGCTGGGATTGCGTGTACGATTACGATTCTGGTGGCTATCCCGAAAGACCCGTTAACGGACTTTGGTCTGCGTGACGTTGCATGGCAAATCGTCGACCTCGGCGGTAATGTGGTGGCGCAAGGTGACGAGTCCAGCTATATCGGGATCGTGCCGTTGGGTACCGCAACGCTGGGTACGCCTGTCGTGTTTAATGCTCGCACTTATACCTTTACGGACGTTGATGGTGCTATTCCGTTTGTGACAACTGGCGCAGAAGGGATCGCACCTGCACTGGTTTCCACTCCACTCGGAAACGGTGATACTGAAATCACGGTCGCTCATCACTTCATGAATGAACGTGGCGAACAAAAGCTTGACGAGGTGCAGGTCAATCTTATGTTCCGTACCTAA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
9c45e6a5353c26b5e6ee5aaf20694260a107eee7476fc270aefddeb716593f00
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7103
Evidence 0,7103
Download PDB

Literature

Title Authors Date PMID Source
Complete genome sequence for lytic Bacteriophages STsAS and SPAsTU against Salmonella enterica serovar Typhi and Paratyphi A Sanirbandha,C., Yukgehnaish,K., Sivachandran,P., Lee,S.Y., Lalitha,P. and Ravichandran,M. — — GenBank