Protein

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Genbank accession
XPB67123.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MPFDSRTCEDGLPYNDTLGRFDCRYWTIDYPLTAIATIVSEGADKFNVYTRSRSNKDLIGVLWNTYDRYGHLSLNYQSDYDYTGTILAFQANFPMPWESTVTINVGGTPYVCRLFPYRQDGANLIPTMSISRGYNIPAGMPIYSYAAVAGGKPNIEGQFWYIIDFSWIKTGFEFTGDKVPTTGITDLFISITDPVVYGLGMDARVRDEGQAKSKGPKTVNLDYITIYCAPGTVISKGDIIQCGIRVPTMKVKSGGLFSKGKVKYNFSKLTTLTLQAQEFIMNGPSEPYGFKIKLANTVKNALWRGDKALAVSLRRDTPVGDRVIDVSFSNITVSGSRTVVAKRNYPNAAHEIGMTSGFDDTYNITPYRQVEQAYQLGYRGFWTSYMGMSHYFKAYGTTVNGAFKVELERNASEPLNHPTVRHLEDLFARMTAYGYKFVWSTAYEILNSVIPVDWKQLDADGDPALTGWSPPSSFIIPTKDECLDYLANVIKHGLSIMQGSGMSVLSFQIGEPWWWDGSYAARKPCIYDPYTRAMYTAETGQPVPTPWIRDFMEPVTDNQRPYLEWLGLKLGRSTNYIRDSVKAAYPAARSTLLFFTPQIMNPAAEMLTIINFPKSEWVYPNYDFMQIEDYDWLINGTMNLNPLTFEAAIDVLLYPAEVVQYFVGFVNTAAEKWVWPNMNIAIWNAQDRNIGQISVWAYPQVIRDSMIYVPGPRPVPPTYPALPRIHGQEGVEDPVKYPLILVNINDEMFLHSGVGERTIAGHTWDGVGFLGTIGRIEETLAGRSSGLEMKLTGIPHALYSEVVKTRRNQKVTVYMTVNGKNVRVVNAGRIYEQAVEVNEGSLTVTYRLGNRLSLIRDSFGGTYTMHDQLAAHPGDTGLEFITAMRDLKLDWGPRT
Physico‐chemical
properties
protein length:895 AA
molecular weight: 100625,33420 Da
isoelectric point:6,13358
aromaticity:0,12514
hydropathy:-0,22570

Domains

Domains [InterPro]
IPR057102
TAS
19–90
IPR057102 IPR057122
IPR057122
TAS
350–704
IPR057122
XPB67123.1
1 895
Architecture
TAS
TAS
TAS 19-90 | TAS 349-704 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XPB67123.1
1 895
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0792
Central domain 11 566 557 0,8819
C-terminal 567 895 328 0,1384
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-566
C-terminal
567-895

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage Lebethron
[NCBI] 		3243727 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas taiwanensis
[NCBI] 		470150 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XPB67123.1 [NCBI]
Genbank nucleotide accession
PP954861 [NCBI]
CDS location
range 11318 -> 14005
strand +
CDS
ATGCCGTTTGATTCCAGGACCTGCGAAGACGGCCTGCCGTACAACGACACGCTGGGTCGCTTTGATTGCCGGTACTGGACTATCGACTATCCCCTTACCGCGATCGCCACGATCGTGAGTGAGGGGGCCGATAAGTTCAACGTGTACACTCGCAGCCGGTCGAACAAGGATTTGATCGGTGTGCTGTGGAACACTTACGACCGGTATGGGCATCTCAGCCTCAACTACCAATCCGACTACGACTACACCGGGACGATCCTGGCCTTCCAAGCCAACTTCCCGATGCCCTGGGAGTCGACAGTCACCATCAACGTGGGCGGCACGCCTTATGTCTGCCGTCTGTTCCCGTACCGCCAGGACGGGGCCAACCTGATTCCAACCATGAGCATCTCCCGGGGATACAACATCCCTGCGGGGATGCCGATTTACTCGTATGCGGCGGTCGCAGGTGGCAAGCCCAACATCGAGGGACAGTTCTGGTACATCATCGACTTCAGCTGGATCAAGACCGGGTTCGAGTTCACTGGCGACAAGGTGCCGACCACAGGCATCACCGACCTGTTCATCTCGATCACCGATCCAGTGGTTTATGGCCTGGGTATGGATGCCAGGGTTCGGGACGAGGGGCAAGCCAAGTCGAAGGGGCCGAAGACGGTCAACCTGGACTACATCACGATCTACTGCGCGCCGGGTACGGTCATCTCCAAGGGTGACATCATTCAGTGTGGTATCCGAGTCCCCACGATGAAGGTGAAGAGTGGTGGACTGTTCAGCAAGGGTAAGGTCAAGTACAACTTCAGCAAGTTGACTACCCTGACGCTGCAGGCCCAGGAGTTCATCATGAACGGGCCATCGGAACCATATGGGTTCAAGATCAAACTGGCGAACACCGTGAAGAACGCTCTGTGGCGTGGGGACAAAGCCCTGGCCGTATCGCTGCGCCGGGACACGCCAGTCGGAGACCGGGTCATCGACGTGAGCTTCTCCAACATCACGGTGTCCGGAAGCAGGACTGTGGTCGCCAAGCGCAACTACCCGAACGCTGCTCACGAGATCGGGATGACCTCCGGCTTCGACGACACCTACAACATCACCCCATATCGCCAGGTCGAGCAGGCGTACCAACTTGGGTACCGCGGGTTCTGGACCTCGTACATGGGGATGTCCCACTACTTCAAGGCGTATGGGACAACGGTCAACGGGGCGTTCAAGGTGGAACTGGAGCGCAACGCCTCCGAGCCACTGAATCACCCGACCGTGCGGCACCTGGAGGACCTCTTCGCCAGGATGACTGCATACGGCTACAAGTTCGTGTGGTCGACCGCTTACGAGATTCTCAACTCGGTCATCCCCGTGGACTGGAAGCAACTCGACGCAGACGGCGACCCGGCACTGACGGGCTGGTCTCCCCCCTCCTCCTTCATCATCCCGACCAAGGATGAATGCCTCGACTACCTGGCCAACGTTATCAAGCATGGCCTGAGTATCATGCAGGGATCGGGGATGTCGGTCCTCAGCTTCCAGATCGGTGAACCCTGGTGGTGGGACGGCTCCTATGCTGCGCGCAAGCCCTGCATCTATGACCCCTACACCCGAGCGATGTACACCGCCGAAACTGGCCAGCCGGTTCCCACCCCGTGGATTCGGGACTTCATGGAGCCGGTCACTGACAACCAGCGCCCGTACCTGGAGTGGCTCGGCCTGAAACTGGGCCGGTCTACCAACTACATTCGGGACTCGGTGAAAGCCGCGTATCCCGCTGCCAGGTCCACGCTGCTGTTCTTCACCCCGCAGATCATGAACCCGGCGGCAGAGATGCTGACTATCATCAACTTCCCGAAGTCCGAGTGGGTCTACCCGAACTACGACTTCATGCAGATCGAGGACTACGACTGGCTCATCAACGGGACGATGAACTTGAACCCACTGACGTTCGAGGCAGCGATCGACGTGCTGCTGTACCCCGCTGAGGTGGTGCAGTATTTCGTCGGGTTCGTGAACACGGCTGCGGAGAAGTGGGTGTGGCCGAACATGAACATCGCCATCTGGAACGCCCAGGACCGCAACATCGGGCAGATCAGTGTCTGGGCATACCCCCAGGTCATCAGGGACTCGATGATCTACGTGCCTGGTCCTCGTCCAGTTCCCCCGACGTATCCAGCGCTGCCCCGCATCCATGGCCAGGAAGGTGTGGAGGATCCGGTGAAGTACCCGCTCATCCTGGTCAACATCAACGACGAGATGTTCCTCCACTCGGGTGTGGGTGAGCGCACGATCGCCGGCCACACGTGGGACGGGGTTGGGTTCCTGGGCACGATCGGGAGGATCGAGGAGACGCTGGCTGGCAGAAGCTCCGGACTGGAGATGAAGTTGACCGGCATTCCCCATGCTCTCTACTCCGAAGTGGTGAAGACCAGGCGCAACCAAAAGGTGACGGTCTACATGACGGTCAACGGGAAGAACGTTCGAGTGGTCAACGCCGGTCGGATCTACGAGCAAGCGGTCGAGGTGAACGAGGGCAGCTTGACGGTGACCTACCGACTCGGCAACCGGCTCAGCCTGATCCGGGACTCGTTCGGCGGGACCTACACCATGCATGACCAGTTGGCTGCGCATCCTGGCGATACTGGCCTGGAGTTCATCACTGCCATGCGTGACCTTAAACTGGACTGGGGGCCGAGGACATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
c1663dba7730e78a4347bfb20019ce965ec3150ee0b0051465b97106b7b77dc4
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2661
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50