Protein

View in Explore
Genbank accession
ADO99880.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,88
Protein sequence
MGTLNVGTVNASTLDAAAALNFPTYSTGSRPSSGIDTGATIYNSTTEKLQTWNGSEWMDIGGGSEPDGSSSDKAAASAAAILQVNPQATDGVYWILLPSVGAKQVYCMMDTNHLGGGGWMLAWKCTRGSTFHYDTSYWTSTNTYNETSQLNRNDGDHKNHVFNYFVAGTLGAVFPDLNNGGQSSVGYNGWTWKQGGVGQTCLQRFQSNYRISSNPRGESMWQGSGFSGQGGFQWYGFNYTGSSNNAMRWGFGWNNEGGESSNDVCSGIGHRRTDSSAGDHIYCCQSTTGVNRSCRAEIWVQ
Physico‐chemical
properties
protein length:301 AA
molecular weight: 32421,85790 Da
isoelectric point:5,62305
aromaticity:0,11960
hydropathy:-0,55814

Domains

Domains [InterPro]
DC_0326
STR
1–297
DC_0326
IPR014716
Unmapped
71–158
IPR014716
NF040941
Unmapped
77–121
NF040941
ADO99880.1
1 301
Architecture
STR
STR 1-297 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Prochlorococcus phage P-HM2
[NCBI] 		445696 Uroviricota > Caudoviricetes > Eurybiavirus >
Host Prochlorococcus marinus subsp. pastoris str. CCMP1986
[NCBI] 		59919 Bacteria > Cyanobacteria > Prochlorales > Prochlorococcaceae > Prochlorococcus > Prochlorococcus marinus

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ADO99880.1 [NCBI]
Genbank nucleotide accession
GU075905.1 [NCBI]
CDS location
range 94888 -> 95793
strand +
CDS
ATGGGAACGCTTAATGTAGGAACTGTAAATGCCAGTACTTTAGATGCTGCAGCAGCTCTAAACTTTCCAACATATAGCACTGGTTCTAGACCTAGTAGTGGAATAGATACAGGTGCTACAATTTATAATAGCACTACCGAGAAGTTACAGACATGGAATGGATCTGAATGGATGGATATCGGTGGTGGTTCAGAACCAGATGGATCTTCTTCTGATAAAGCAGCAGCAAGTGCAGCAGCTATATTACAAGTTAATCCTCAAGCAACAGATGGTGTCTATTGGATTTTACTCCCAAGTGTAGGAGCAAAGCAAGTATATTGTATGATGGATACAAACCACTTGGGTGGTGGAGGTTGGATGTTAGCATGGAAATGTACTAGAGGAAGTACATTCCACTATGACACTAGTTACTGGACATCTACTAACACATATAATGAAACATCTCAGTTGAATAGAAACGATGGTGATCATAAGAACCACGTATTTAATTACTTTGTTGCAGGAACACTCGGTGCTGTATTTCCAGACTTGAACAATGGTGGACAATCATCAGTTGGTTATAATGGTTGGACTTGGAAACAAGGTGGTGTAGGACAGACATGCTTACAAAGATTCCAAAGTAACTATCGGATATCAAGTAACCCACGTGGAGAAAGTATGTGGCAGGGATCTGGATTCTCTGGTCAAGGTGGATTCCAATGGTATGGATTTAACTATACTGGATCAAGTAACAATGCTATGCGTTGGGGATTTGGTTGGAACAACGAGGGTGGAGAAAGTTCTAATGACGTTTGTAGTGGTATCGGTCATCGTAGAACAGACTCATCTGCAGGAGATCATATCTACTGCTGTCAATCCACTACTGGTGTAAATAGAAGCTGTCGTGCGGAGATCTGGGTACAATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
ea6cf6bfd3c5f94e01502bc4a329d769f93770268400260472a7fa799900b2e3
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5808
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Cyanophage M4-259 Henn,M.R., Sullivan,M.S., Osburne,M.S., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Erlich,R., Young,S.K., Koehrsen,M., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Borenstein,D., Chen,Z., Engels,R., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heiman,D., Hepburn,T., Howarth,C., Jen,D., Larson,L., Lewis,B., Mehta,T., Park,D., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., Walk,T., White,J., Yu,Q., Coleman,M.L., Huang,K.H., Weigele,P.R., DeFrancesco,A.S., Kern,S.E., Thompson,L.R., Fu,R., Hombeck,B., Chisholm,S.W., Haas,B., Nusbaum,C., Galagan,J. and Birren,B. 2011-09-23 — GenBank