Protein

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Genbank accession
XTK88104.1 [GenBank]
Protein name
tail tube protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,68
Protein sequence
MPLSSQSIKNLKGGISQQPDVLRFPNQGARQINGWSSETKGLQKRPPSVFIKKLAEHGTFGAKPLIHLINRDAVEQYHMVFHNNTVDVWDLKGNHYGTTGISAYLATANPREDLRLLTVADYTFIVNRNVAVEMDETLTHAGYPALNSRAIVSCRGGQYGRTLKVRANGVEIAVYELPDGLAADNTELSKEVAAMDAQAIVKQLVDRINNGWVPTGSPPGTPPSGGTAVHGFTATEGPSHLVITKAGGITSIQTEDGYADQLIAGLIYQVQTTVKLPIAAPDGYLVEITGEATRTGDNYWVRYDGSAKVWKETVKPGIISGVKASTMPHAIIRQADGSFKFTSLDWTKRTCGDDETNPMPSLLDNKINDIFFFRNRLGFLSGENVVMSRTGRYFQLFPSSVAASGDDDPIDVAVSHNRISILKYAVPFSEQLLLWSDQAQFVMTSQGTLSAKTAQLDLTTEFDVMDTARPFGLGRAVYFSAPRARFSSIKRYYSVADVSNVKNAEDISGHIPTYIPNRVHLVHGSGTENFITTLTDGQTDRLFVYKFLYQDEQLAQQSWSHWEYGKCSILSSFCIGSYLYLIMDRDEGILLERMEFTNDTLDFPEEPFRCHVDGKMLVNLTEYDPDRNETYFNVFTLYGGTPSVDTKFWVIDAQGWAEEFDSTEWGDGLIRLGGDRRGQRVVVGRSYEFLYEFSKFLIKVQADDGTVSTEDSGRLQLRKVWLNYEQSGAFEIEIDNGRNIFKSYMTGARLGAGQILGQINLGTGQHRFSVTGNARDQKVTAKSSNPQPMNIIGCGFEGNYIRRSNGI
Physico‐chemical
properties
protein length:807 AA
molecular weight: 89539,57040 Da
isoelectric point:5,74622
aromaticity:0,10161
hydropathy:-0,32305

Domains

Domains [InterPro]
IPR058003
TTP
1–807
IPR058003
XTK88104.1
1 807
Architecture
TTP
TTP 1-807
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XTK88104.1
1 807
Domain Start End Length (AA) Confidence
N-terminal 1 139 139 0,9922
Central domain 140 338 200 0,3052
C-terminal 339 807 468 0,2240
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-139
Central
140-338
C-terminal
339-807

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage Stamos
[NCBI] 		3418345 No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XTK88104.1 [NCBI]
Genbank nucleotide accession
PV565045 [NCBI]
CDS location
range 24981 -> 27404
strand +
CDS
ATGCCACTTTCAAGTCAAAGCATCAAGAACCTCAAAGGTGGCATCTCGCAGCAGCCGGATGTCTTGCGGTTCCCCAATCAGGGCGCGCGCCAGATCAACGGCTGGTCCTCGGAGACGAAGGGCCTTCAGAAGCGGCCACCTTCCGTGTTCATCAAGAAACTCGCAGAGCATGGCACTTTCGGTGCGAAGCCACTAATCCACCTAATCAACCGGGACGCAGTGGAGCAGTATCACATGGTCTTCCACAACAACACCGTGGACGTATGGGACCTCAAGGGGAACCACTACGGCACCACAGGGATCTCCGCGTACCTCGCAACGGCGAACCCTCGTGAGGACCTGCGACTGCTCACAGTGGCGGACTATACGTTCATTGTGAACCGTAACGTTGCCGTTGAGATGGATGAGACGCTGACCCACGCCGGTTACCCTGCGCTGAACAGCCGGGCAATCGTATCGTGCCGTGGTGGCCAGTACGGGCGCACCTTGAAGGTACGTGCCAACGGTGTCGAGATCGCAGTCTATGAGCTGCCTGATGGTCTCGCTGCGGACAACACCGAGCTAAGCAAAGAGGTGGCCGCAATGGACGCCCAAGCAATCGTCAAGCAGCTCGTTGACCGGATCAACAACGGATGGGTTCCAACAGGGTCCCCTCCCGGTACTCCACCGAGTGGCGGTACGGCAGTCCACGGGTTCACCGCAACGGAGGGACCGAGCCATCTGGTCATCACCAAGGCCGGTGGCATCACTTCGATCCAGACCGAGGACGGATATGCTGACCAGTTGATTGCAGGCCTGATCTATCAGGTCCAGACGACCGTTAAGCTGCCCATTGCGGCGCCTGATGGTTACCTCGTGGAAATCACCGGGGAGGCCACACGGACGGGCGACAACTACTGGGTCCGTTACGATGGGTCCGCGAAGGTATGGAAGGAGACCGTGAAGCCGGGGATCATCTCTGGGGTCAAGGCCTCGACCATGCCTCACGCGATCATCCGCCAAGCCGATGGGTCCTTCAAGTTCACCTCGCTGGACTGGACCAAGCGCACCTGCGGTGACGACGAGACCAACCCGATGCCGAGCCTGCTGGACAACAAGATCAACGACATCTTCTTCTTCCGCAACCGCCTCGGGTTCCTGAGCGGTGAGAACGTGGTGATGAGTCGCACCGGTCGTTACTTCCAGTTGTTCCCGAGCAGCGTAGCGGCCTCTGGTGACGACGATCCAATCGACGTAGCCGTGAGTCACAACCGCATCTCCATCCTGAAGTACGCCGTGCCGTTCTCTGAGCAGCTCCTACTGTGGTCCGATCAGGCTCAGTTCGTGATGACCTCTCAGGGCACATTGAGTGCCAAGACGGCCCAGCTCGACCTGACCACTGAGTTCGACGTAATGGACACCGCACGGCCCTTCGGCCTCGGTCGCGCCGTCTACTTCAGTGCGCCTCGGGCCCGCTTCAGCTCCATCAAGCGCTACTACTCGGTGGCCGATGTGAGCAACGTGAAGAACGCTGAGGACATCTCCGGGCACATCCCAACGTACATCCCGAACAGGGTCCATCTGGTCCACGGATCGGGCACCGAGAACTTCATCACGACCCTTACCGATGGTCAGACTGATCGGCTGTTCGTGTACAAGTTCCTCTATCAGGATGAGCAGCTGGCACAGCAGTCGTGGAGCCACTGGGAGTACGGCAAGTGCTCCATCCTGTCTTCGTTCTGCATCGGCTCGTACCTGTACCTCATCATGGACCGTGACGAGGGCATCCTGCTGGAGCGCATGGAGTTCACCAACGACACCTTGGACTTCCCTGAGGAGCCCTTCCGGTGCCACGTGGACGGTAAGATGCTGGTGAACCTGACGGAGTACGACCCAGACCGCAACGAGACCTACTTCAACGTGTTCACGCTGTACGGCGGTACGCCCTCGGTAGACACCAAGTTCTGGGTCATTGATGCACAGGGCTGGGCCGAGGAGTTCGACAGCACCGAATGGGGCGATGGGCTGATCCGGCTGGGCGGTGACCGCAGAGGCCAACGTGTGGTCGTCGGTCGCTCGTATGAGTTCCTGTACGAGTTCTCGAAGTTCCTCATCAAGGTCCAAGCCGATGACGGCACGGTCTCCACTGAGGACTCCGGGCGCCTCCAGCTCCGCAAGGTATGGCTCAACTACGAGCAGTCCGGGGCCTTCGAGATTGAGATCGACAACGGTCGGAACATCTTCAAGTCCTACATGACGGGCGCCCGATTGGGTGCTGGTCAGATCCTCGGGCAGATCAACCTCGGCACTGGGCAGCATCGGTTCTCCGTAACGGGGAACGCACGGGACCAAAAGGTCACCGCGAAGTCCTCCAATCCTCAGCCAATGAACATCATCGGGTGCGGCTTCGAGGGCAACTACATCCGCCGATCCAACGGCATCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0d7b827ba120144e955d72ebd8ca46cc1855f1c560dde67bcb2f73bfcd324aa1
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2859
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50