Protein

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Genbank accession
UJD05958.1 [GenBank]
Protein name
baseplate wedge protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MKQNLNIGQVVDDGSGDYLRLGGQKINNNFDELYYQLGDGTYPHAAGAWKTHSAATSIRLDPKMGDSFAVNTQAARVTVYLPKGKPSDYNSVIRLRDVWSTWRLSPVTVVAASGDTIKGSSSPKTFNTNYQDLELVYCSPGRWEYINGKTIEKFTNGDLATVSKKSIIATEGQTDFLDIFDGEEYNPESLNVYRRGNMLFYGENGFDPDNADHGSPGPNSTIVALNKKDVRLVKPCSAGDVIIFETFLDGIGVWRSSYNKVTVMVRSNKLTSEKTVQGSKIVADLSTLREFSTADLGVLPGIDMNPNSIEVEINGKSQVEAGTGGLPEFICEGAPGESSQDCIANGGTWVQSDSDYRLVFDTDGIKVSAIRFGQPFEDQDIITVRWYNNNIGTTMTMDDIVSETDLIYMNAEETVDLKNRIEYTDYQNPGQKTKVDVPNEYDIRLSNISAFFDSIYPIGTIYENAHNPANPRDYMGMGVWKMYGEGYASVGWASDISNPYFALNNNDLDSSGRPSHSAGGTVGEVEFQISANNIPELKSDDTVLIADDNGTVVIGGCQLDPDASGPGYSKYREGSITVNKGAGGLPISNVQPSITVYRWIRVA
Physico‐chemical
properties
protein length:603 AA
molecular weight: 65954,35430 Da
isoelectric point:4,60233
aromaticity:0,09453
hydropathy:-0,41575

Domains

Domains [InterPro]
IPR034695
Unmapped
1–603
IPR034695
IPR036240
STR
1–229
IPR036240 IPR054430 IPR053827
DC_2238
STR
1–580
DC_2238
IPR008987
ATT
2–152
IPR008987 IPR056391
G3DSA:1.20.5.960
Unmapped
13–41
G3DSA:1.20.5.960
UJD05958.1
1 603
Architecture
ATT
STR
ATT
ATT 1-263 | STR 264-450 | ATT 451-602 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UJD05958.1
1 603
Domain Start End Length (AA) Confidence
N-terminal 1 315 315 0,9087
Central domain 316 514 200 0,1865
C-terminal 515 603 88 0,9151
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-315
Central
316-514
C-terminal
515-603

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage PWKp18
[NCBI] 		2863268 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UJD05958.1 [NCBI]
Genbank nucleotide accession
MZ634349 [NCBI]
CDS location
range 139758 -> 141569
strand -
CDS
ATGAAACAGAATTTAAATATTGGTCAAGTAGTCGACGACGGCAGTGGAGACTACCTCCGCCTTGGTGGCCAAAAGATTAATAACAACTTTGATGAACTATACTATCAATTAGGTGATGGTACTTATCCTCATGCAGCCGGTGCCTGGAAAACCCACTCGGCGGCCACTTCTATCCGTCTTGACCCTAAAATGGGTGATAGCTTCGCGGTTAATACTCAGGCAGCGCGTGTGACTGTTTATCTTCCTAAAGGTAAACCTTCTGATTACAATAGTGTGATTCGTCTTCGTGATGTATGGTCCACCTGGCGTTTATCTCCAGTGACTGTTGTTGCTGCTTCCGGCGATACCATTAAAGGTTCTTCATCTCCTAAGACTTTTAATACAAACTATCAAGACCTTGAGTTGGTTTATTGCTCACCTGGTAGATGGGAATATATTAATGGCAAAACTATTGAGAAATTTACCAACGGCGATTTAGCCACAGTTTCTAAGAAATCAATTATTGCTACTGAAGGCCAAACTGACTTCTTAGATATTTTTGATGGTGAAGAATATAATCCAGAATCTCTGAACGTCTATCGTCGCGGTAATATGCTGTTTTATGGTGAAAATGGATTTGATCCGGATAATGCTGATCACGGTTCTCCTGGCCCAAACAGTACTATCGTGGCCTTGAATAAAAAGGATGTTAGGCTAGTTAAACCTTGTTCAGCCGGCGATGTAATTATTTTCGAAACCTTTTTAGACGGTATAGGTGTATGGCGTAGCTCATACAACAAAGTTACTGTTATGGTTCGCAGTAACAAACTTACCTCTGAGAAAACGGTCCAAGGTTCTAAAATTGTAGCCGATTTGAGCACCTTGCGTGAATTTAGCACTGCTGATTTAGGCGTTCTTCCTGGTATAGACATGAACCCTAATTCTATTGAGGTAGAAATAAATGGTAAAAGCCAGGTTGAAGCAGGAACCGGCGGGCTCCCAGAATTTATTTGTGAAGGTGCTCCAGGCGAATCTTCACAGGATTGTATAGCTAATGGTGGGACTTGGGTCCAATCGGACTCCGATTATCGCTTAGTATTTGATACTGATGGTATTAAAGTTTCGGCTATCAGATTCGGCCAGCCATTTGAAGACCAAGATATCATTACTGTCCGTTGGTATAATAACAATATCGGAACCACGATGACCATGGATGATATTGTTTCTGAGACAGATTTGATTTATATGAATGCCGAAGAAACAGTGGACCTTAAAAACAGGATCGAATACACTGACTATCAGAATCCAGGCCAAAAAACTAAAGTTGATGTGCCTAATGAATATGATATTCGGTTATCTAACATTTCGGCATTTTTTGATTCGATTTATCCTATCGGAACCATTTATGAAAATGCTCATAACCCAGCTAACCCGCGAGATTATATGGGTATGGGTGTATGGAAGATGTACGGTGAAGGCTATGCTTCTGTAGGGTGGGCTTCTGATATAAGCAATCCTTACTTTGCATTAAATAATAATGACCTAGACAGTTCAGGTAGGCCGTCTCATAGTGCTGGAGGCACGGTCGGTGAGGTTGAATTCCAGATTTCGGCAAATAACATCCCGGAACTCAAATCTGATGACACAGTTCTTATTGCCGATGATAATGGTACTGTAGTTATCGGCGGATGTCAATTAGACCCAGATGCGTCTGGTCCTGGCTATTCTAAATATAGAGAAGGTTCTATCACCGTAAACAAAGGCGCCGGTGGCTTACCTATTTCTAACGTTCAACCTTCTATAACTGTCTATCGCTGGATAAGGGTGGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
dcd0638c2fdf931f0c67e8b1c43a49e7de4f098f4646400b64b01e7d87c02a88
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6567
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Lytic Bacteriophages against Mutidrug-Resistant Klebsiella pneumoniae: Development of an Effective Phage-based Approach to Combat Multidrug Resistance Martins,W.M.B.S., Cino,J., Li,M., Lenzi,M.H., Sands,K., Portal,E., Mathias,J., Hansan,B., Dantas,P., Migliavacca,R., Hunter,J.R., Medeiros,E.A., Gales,A.C. and Toleman,M.A. 2021 — GenBank