Protein

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Genbank accession
BAG70392.1 [GenBank]
Protein name
tail tuber protein B
RBP type
TSP
Evidence DepoScope
Probability 0,99
Protein sequence
MGKVVGSYASVVRGVSEQIPQDRLPGQFGEMVNMVDDPVRGKARRQGSAMIDERKLMGGTLTDTQKEYLRNYRVYDFFLGGIEYSLIYQSQPRAHGDTLPLLQCLNKATGQFLTVNLSESSAGALDPWKDGGISAVTLVGKFLVLASNQLGPGYSTTDKYAATQEWGVAWVRGGAYSRTYKLVIRGEPDNYPGTPVFTATYTTMASSYPNLLDTSDIAQSDPEYQKKVNDRVNAYNSAVNKWVGDALASTQPQNIAAQLSGQLVAGGYNNLAVVGGSIFMDHILDMTCDDSGDGTLFRAVFNEVDDPAKLSTIHGDQKIVRVKPKGTDETYYMRAVKTDTAAAHFGPVQWVEGAAQVVTPGQVFAIASITSTTLTLANSPAQLATAIGSPVPGYAASVCGDMTDKGAVPYFFGRKVSHMAMFQDRMVIVSNGVILMSRTGDYFNWFRKSKLRVDDDDPVEAFALGSEDDIISQSSSYNKDLFLFGERGQYALPGRSAITPKTISITQVAGERDAMLARPIPVGNLLFYGKYEAKPDQSGPSKYAASLNQFQLGLFQDTPETYNASQQLDGYLQGRVIELASLPKPYTVFCRTDGLDTGLYTYRFIDQQGTQARQFDSWSRWEWDARVGTLIGLTTYKATLYAYVMRTNAQGVWIGAEQFIMDSSPSASSYLDSLRVGTDYDAAVSTSRFIAPDNPSDEKEHQFVGGKRPYPTAYLGGVVTNYADLKANVFGGDNTKYDVGFQYQSYTDLTPPYVRDRNDKAIVNGRLVINRYTVSVTDTAGMDSFLTAQGQTTNVQRFNGRRVGISNNRVGIQPFSTAVVDVPCGRSNTEHSMRLQSRTWLPMTVSAIEWVGQLFINSRRV
Physico‐chemical
properties
protein length:861 AA
molecular weight: 94450,89180 Da
isoelectric point:5,95737
aromaticity:0,10453
hydropathy:-0,30383

Domains

Domains [InterPro]
DC_0058
STR
1–861
DC_0058
IPR058003
TTP
157–860
IPR058003
BAG70392.1
1 861
Architecture
STR
STR 1-861
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
BAG70392.1
1 861
Domain Start End Length (AA) Confidence
N-terminal 1 161 161 0,9848
Central domain 162 393 233 0,2943
C-terminal 394 861 467 0,1448
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-161
Central
162-393
C-terminal
394-861

Taxonomy

  Name Taxonomy ID Lineage
Phage Ralstonia phage RSB1
[NCBI] 		551790 Uroviricota > Caudoviricetes > Autographivirales > Okabevirinae > Higashivirus
Host Ralstonia solanacearum
[NCBI] 		305 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
BAG70392.1 [NCBI]
Genbank nucleotide accession
AB451219 [NCBI]
CDS location
range 25379 -> 27964
strand +
CDS
ATGGGCAAGGTTGTAGGATCGTACGCCTCAGTCGTGCGAGGCGTCTCAGAACAGATTCCGCAGGACCGTCTCCCCGGCCAGTTCGGTGAGATGGTGAACATGGTCGATGACCCGGTGCGCGGTAAGGCCCGCCGTCAGGGGTCGGCCATGATTGACGAGCGTAAGCTCATGGGCGGGACATTGACGGATACCCAGAAGGAGTATCTGCGCAACTACCGCGTTTACGATTTCTTCCTCGGTGGAATTGAGTACAGCCTCATCTACCAGTCGCAGCCTCGCGCACACGGCGACACGCTTCCTCTGCTCCAGTGCTTGAACAAGGCGACTGGACAGTTCCTTACGGTCAACCTCAGCGAGTCCTCAGCGGGCGCGCTCGATCCGTGGAAGGACGGCGGTATCTCGGCAGTCACGCTCGTCGGAAAGTTCCTCGTGCTGGCGTCGAATCAACTCGGGCCGGGTTACAGCACCACGGACAAGTACGCTGCCACGCAGGAGTGGGGCGTGGCGTGGGTGCGCGGAGGCGCGTACAGTCGAACGTACAAGCTGGTCATTCGCGGAGAGCCGGACAACTACCCCGGCACGCCTGTGTTTACCGCCACGTACACCACGATGGCATCGAGCTACCCGAATCTGCTCGACACGTCAGATATCGCGCAGAGCGACCCGGAGTACCAGAAGAAGGTGAACGACCGAGTGAACGCCTATAACTCGGCAGTGAACAAGTGGGTAGGCGACGCGCTTGCCTCTACACAGCCGCAGAATATCGCTGCGCAACTCTCGGGACAATTGGTGGCCGGCGGGTACAACAATCTCGCGGTGGTCGGCGGCTCGATCTTCATGGACCACATCTTAGACATGACGTGCGATGACTCCGGCGACGGTACGTTGTTTCGCGCGGTATTCAACGAAGTGGATGACCCGGCTAAGCTGAGCACGATTCACGGCGATCAGAAAATCGTCCGCGTCAAGCCCAAGGGCACAGACGAGACGTACTATATGCGCGCGGTTAAGACGGATACCGCAGCAGCACACTTCGGCCCCGTGCAGTGGGTGGAGGGCGCAGCGCAGGTCGTCACACCGGGACAGGTGTTCGCCATTGCGAGCATCACGTCCACTACACTCACGCTTGCGAACAGCCCGGCGCAACTTGCTACGGCAATCGGATCGCCCGTTCCCGGATACGCGGCTAGCGTGTGCGGTGACATGACGGACAAGGGCGCGGTGCCCTACTTCTTCGGTCGTAAGGTGTCGCATATGGCGATGTTTCAGGACCGCATGGTGATTGTGTCAAACGGCGTTATCTTGATGTCGCGCACCGGGGATTACTTCAACTGGTTCCGCAAGAGCAAGCTACGAGTCGATGACGACGATCCCGTCGAGGCGTTTGCCCTCGGAAGCGAGGACGACATTATCTCGCAGTCTAGCTCGTACAACAAGGACTTGTTCCTGTTCGGAGAGCGGGGGCAGTACGCGTTGCCGGGACGCAGCGCCATCACACCGAAGACCATCTCCATCACGCAAGTGGCGGGGGAGCGCGACGCGATGCTAGCACGGCCCATTCCGGTGGGCAACCTGCTGTTCTACGGGAAGTACGAAGCGAAGCCGGATCAGTCCGGCCCGAGCAAGTATGCGGCCAGCCTGAACCAGTTCCAGCTTGGCCTGTTTCAGGACACGCCGGAGACGTACAACGCCTCGCAACAGCTTGACGGTTACCTACAAGGGCGCGTGATTGAGCTTGCATCGCTGCCCAAGCCCTACACGGTCTTCTGCCGCACAGACGGGCTGGACACCGGCCTGTACACGTATCGCTTCATCGACCAGCAGGGCACACAAGCTCGTCAGTTCGACTCGTGGTCCCGGTGGGAGTGGGATGCGCGCGTCGGTACGCTTATCGGGTTGACGACGTATAAAGCAACGCTATACGCCTACGTGATGCGTACGAACGCACAAGGTGTATGGATCGGCGCGGAGCAGTTCATCATGGACTCCTCGCCGTCAGCGTCCAGCTATCTCGACTCGCTGCGTGTCGGCACGGACTATGACGCGGCAGTATCCACGAGCCGCTTCATTGCGCCCGACAACCCGTCGGACGAGAAGGAGCATCAGTTCGTGGGTGGGAAGCGTCCGTACCCAACAGCCTACCTAGGTGGCGTGGTCACAAACTACGCTGACCTTAAGGCAAACGTATTTGGTGGCGACAACACCAAGTATGACGTGGGATTCCAGTATCAGTCCTACACGGACCTGACACCGCCGTACGTGCGCGACCGCAATGACAAGGCCATCGTCAACGGGCGTCTCGTTATCAACCGATACACGGTTAGCGTGACGGACACTGCGGGCATGGACTCGTTCCTGACGGCACAAGGACAGACCACGAACGTGCAGCGCTTTAACGGGCGGCGCGTGGGTATCAGCAACAACCGGGTCGGCATCCAGCCGTTCTCGACCGCCGTCGTGGACGTGCCATGCGGGCGCTCGAATACCGAGCACAGCATGCGGCTACAGTCGCGTACGTGGTTGCCTATGACCGTCTCGGCAATCGAGTGGGTTGGGCAGCTATTCATCAACAGCCGTCGCGTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
16a0766666f318241d09858845f4766982d47ba4f6cc0be9e6fa5377aec988b0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8281
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic characterization of Ralstonia solanacearum phage phiRSB1, a T7-like wide-host-range phage Kawasaki,T., Shimizu,M., Satsuma,H., Fujiwara,A., Fujie,M., Usami,S. and Yamada,T. 2009 18952798 GenBank