Protein

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Genbank accession
XMR02070.1 [GenBank]
Protein name
regulator of chromosome condensation
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MLPFVRMFDYGNTVVAPTGIKDFQANGSHCMALTYSGEMWAYGTSTSGSMGTGFTVGAADKGWYKSNISNVKSFSSNMQTSTVALTNDDRVLVCGSTRFDKFSTPDIASSNLDWLDVTDHIPQEVIDAGMKQVINHAYYVAIFTENNLLYSVALSLGNTSTIIDRTWRRNTFGDIQVERVVSLTQTPSGPLCIVQDADGYQYGIGYNGNKIIDNTSTNSYSVYTKMGTLPYNEFAISNSGAFSSAVLSDGRSVYSGKFPKSFNNSFGSFLKVGAVSNTVFGLDAKNMRGQYDQNQLPIASADNNASNGVVNLRNVPAGTQTKDIRFICGNDVKNVYIIYTNEDGISSFYGLGPNFDQNSSAYAQFVKVDLPGALLN
Physico‐chemical
properties
protein length:376 AA
molecular weight: 40812,95070 Da
isoelectric point:5,22222
aromaticity:0,11436
hydropathy:-0,19840

Domains

Domains [InterPro]
DC_0433
ATT
1–169
DC_0433 DC_1135
IPR009091
STR
9–260
IPR009091
IPR009091
STR
17–253
IPR009091
XMR02070.1
1 376
Architecture
ATT
STR
RBD
ATT 1-169 | STR 170-260 | RBD 261-376
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XMR02070.1
1 376
Domain Start End Length (AA) Confidence
N-terminal 1 15 15 0,8947
Central domain 16 230 216 0,6453
C-terminal 231 376 145 0,3714
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-15
Central
16-230
C-terminal
231-376

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage Turkey5
[NCBI] 		3375711 No lineage information
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XMR02070.1 [NCBI]
Genbank nucleotide accession
PQ471516 [NCBI]
CDS location
range 336341 -> 337471
strand -
CDS
ATGTTACCTTTTGTTAGAATGTTTGATTATGGGAATACAGTGGTTGCTCCCACTGGTATAAAGGATTTCCAAGCAAATGGAAGCCACTGTATGGCACTAACATATAGTGGTGAGATGTGGGCTTATGGTACAAGTACAAGTGGATCAATGGGAACCGGATTCACGGTGGGTGCTGCTGATAAGGGTTGGTACAAGTCTAACATTAGTAATGTTAAATCATTCAGTTCTAATATGCAGACTAGCACAGTGGCTTTGACAAATGATGATAGAGTGCTAGTTTGTGGCTCAACTAGATTTGACAAATTCAGTACTCCAGATATTGCATCATCTAACCTTGATTGGTTGGATGTTACTGATCATATTCCACAGGAAGTTATTGATGCTGGGATGAAGCAAGTTATTAACCACGCATATTATGTTGCCATTTTTACTGAAAACAATCTATTATATAGTGTGGCATTATCTTTGGGTAATACTAGTACTATAATAGATAGAACATGGCGAAGAAATACATTTGGTGATATACAAGTTGAACGTGTTGTTTCGTTGACACAAACCCCAAGTGGTCCTTTGTGTATAGTTCAAGATGCAGACGGATACCAGTATGGTATTGGATATAATGGTAATAAGATTATTGATAATACTTCCACTAATTCATATTCTGTATATACCAAAATGGGTACACTTCCTTACAATGAATTTGCCATATCGAATAGCGGGGCATTCAGTTCAGCGGTATTATCAGATGGGAGAAGTGTTTATAGTGGTAAATTTCCAAAGTCATTCAATAATAGTTTTGGTTCATTTTTGAAAGTTGGTGCGGTATCAAATACTGTGTTTGGTTTAGATGCAAAAAATATGCGTGGTCAATATGATCAAAATCAATTACCAATTGCGTCGGCTGATAACAATGCAAGTAATGGCGTTGTTAACCTTCGTAATGTTCCAGCGGGAACACAAACGAAAGACATTCGATTTATATGCGGAAATGATGTAAAGAACGTTTATATCATATACACAAATGAAGACGGCATTAGCTCATTTTATGGATTGGGACCAAACTTTGATCAAAATTCCTCAGCATATGCACAATTCGTCAAAGTGGATTTGCCAGGGGCATTACTAAATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0776f3780af5ad575df4e732c75a8e7a5c1c72f37b126328ba00a389dcdcac43
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7497
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Transient expression effect of genes from a Jumbo E. coli phage Petrzik,K. and Brazdova,S. 2023-07-26 — GenBank